RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 NOD2Q9HC29 1040 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 IRAK4Q9NWZ3 460 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 PCLOQ9Y6V0 5065 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 CMYA5Q8N3K9 4069 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 CR1P17927 2039 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 IGHV1-45A0A0A0MS14 117 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 VSTM2BA6NLU5 285 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 GPRIN2O60269 458 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 PGLSO95336 258 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 PYGLP06737 847 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 MTHFD1P11586 935 aaKnown RBP6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 TFEBP19484 476 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 FDXRP22570 491 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 EPHB2P29323 1055 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 GNA15P30679 374 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 PAPOLAP51003 745 aaKnown RBP6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 YBEYP58557 167 aaPredicted RBP6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 MESDQ14696 234 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 CDO1Q16878 200 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 C15orf59Q2T9L4 293 aaPredicted RBP6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 GPRC6AQ5T6X5 926 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 PGBD5Q8N414 524 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 EMC1Q8N766 993 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 ZBED6CLQ96FA7 236 aaPredicted RBP6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 UCN2Q96RP3 112 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 REG4Q9BYZ8 158 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 SLC39A8Q9C0K1 460 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 LRRC19Q9H756 370 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 UBTD1Q9HAC8 227 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 METTL14Q9HCE5 456 aaKnown RBP6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 EXOC1Q9NV70 894 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 C3orf18Q9UK00 162 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 ALG6Q9Y672 507 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 MAU2Q9Y6X3 613 aa6.48□□□□□ -1.37
SCAMP1-206ENST00000618166 A0A1B0GX78 115 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 NPIPA2E9PIF3 369 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 NPIPA3F8WFD2 350 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 BTN3A1O00481 513 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 TFECO14948 347 aaPredicted RBP6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 MED7O43513 233 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 STX10O60499 249 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 SOCS5O75159 536 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 SMNDC1O75940 238 aaKnown RBP eCLIP6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 NEURL1O76050 574 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 SLC25A14O95258 325 aaPredicted RBP6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 PGRP06401 933 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 SP1P08047 785 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 ACVR2AP27037 513 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 CDC25BP30305 580 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 RAB28P51157 221 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 MAXP61244 160 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 NSUN2Q08J23 767 aaKnown RBP eCLIP6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 SLC10A7Q0GE19 358 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 NFE2L1Q14494 772 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 MEA1Q16626 185 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 MAPKAPK3Q16644 382 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 NFIL3Q16649 462 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 GXYLT1Q4G148 440 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 ATP13A4Q4VNC1 1196 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 ACER2Q5QJU3 275 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 PRR31Q5SQ13 230 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 C6orf52Q5T4I8 152 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 FAM102AQ5T9C2 384 aaPredicted RBP6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 ALS2CLQ60I27 953 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 ZNF585AQ6P3V2 769 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 UNC5DQ6UXZ4 953 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 UMODL1-AS1Q8N2C9 162 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 C19orf47Q8N9M1 422 aaKnown RBP6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 OR52N2Q8NGI0 321 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 LMO3Q8TAP4 145 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 RNASE6Q93091 150 aaKnown RBP6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 ZMYND19Q96E35 227 aaPredicted RBP6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 PIGQQ9BRB3 760 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 SYNCQ9H7C4 482 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 KIR3DX1Q9H7L2 352 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 TRIM39Q9HCM9 518 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 FANCLQ9NW38 375 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 TRMT1Q9NXH9 659 aaKnown RBP6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 CNTN6Q9UQ52 1028 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 PPIL1Q9Y3C6 166 aa6.47□□□□□ -1.37
SCAMP1-206ENST00000618166 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 GOLGA8SH3BPF8 625 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 FFAR3O14843 346 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 GPR42O15529 346 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 ONECUT2O95948 504 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 EPHA1P21709 976 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 BMP5P22003 454 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 MCM3P25205 808 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 THBS2P35442 1172 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 SOX5P35711 763 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 PEX19P40855 299 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 EFNA3P52797 238 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 PRKAA1Q13131 559 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 XRCC4Q13426 336 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 VEZF1Q14119 521 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 IHHQ14623 411 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 SLC5A12Q1EHB4 618 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 CCDC14Q49A88 953 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 ZCWPW2Q504Y3 356 aa6.46□□□□□ -1.37
SCAMP1-206ENST00000618166 WIPI1Q5MNZ9 446 aaPredicted RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms