RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	SPATA13	Q96N96	652 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
TP53-222	ENST00000617185	ZNF416	Q9BWM5	594 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	TNFRSF12A	Q9NP84	129 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-222	ENST00000617185	RIMKLB	Q9ULI2	386 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	SCML1	Q9UN30	329 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	STON1	Q9Y6Q2	735 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	COL1A2	P08123	1366 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	STX16	O14662	325 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	ERN1	O75460	977 aa	Known RBP	11.3	□□□□□ -0.6
TP53-222	ENST00000617185	MATN4	O95460	622 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	BRCC3	P46736	316 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	AP1S2	P56377	157 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	MAB21L1	Q13394	359 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	QPRT	Q15274	297 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	FAM83E	Q2M2I3	478 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	FBXO47	Q5MNV8	452 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	RETSAT	Q6NUM9	610 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	BNIPL	Q7Z465	357 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	FAM131B	Q86XD5	332 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	TMC8	Q8IU68	726 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	ABI1	Q8IZP0	508 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	GDPD1	Q8N9F7	314 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	FRS2	Q8WU20	508 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.3	□□□□□ -0.6
TP53-222	ENST00000617185		Q96MT0	163 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	PAAF1	Q9BRP4	392 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	SNRNP25	Q9BV90	132 aa	Known RBP	11.3	□□□□□ -0.6
TP53-222	ENST00000617185	PCDHB16	Q9NRJ7	776 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	MUTYH	Q9UIF7	546 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	AGO1	Q9UL18	857 aa	Known RBP	11.3	□□□□□ -0.6
TP53-222	ENST00000617185	PCDHB5	Q9Y5E4	795 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	SNX8	Q9Y5X2	465 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185	ACTL7A	Q9Y615	435 aa		11.3	□□□□□ -0.6
TP53-222	ENST00000617185		A0A1W2PQ09	198 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	SLC12A8	A0AV02	714 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185		F8W810	466 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	FZD6	O60353	706 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	KPNA6	O60684	536 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	RFPL3	O75679	317 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	CYP7B1	O75881	506 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	OLFM2	O95897	454 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	CHM	P24386	653 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	NR2C2	P49116	596 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	CENPA	P49450	140 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	CDH13	P55290	713 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	DAB2	P98082	770 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	BAK1	Q16611	211 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	KLHL12	Q53G59	568 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	GNAS	Q5JWF2	1037 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	FAM209B	Q5JX69	171 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	ANKRD34A	Q69YU3	496 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	TMEM135	Q86UB9	458 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	KCNMB4	Q86W47	210 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	C9orf62	Q8N4C0	152 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	AADAT	Q8N5Z0	425 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	KCT2	Q8NC54	265 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	TSPEAR	Q8WU66	669 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	RIT1	Q92963	219 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	C19orf60	Q96EN9	201 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	GPR137	Q96N19	417 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	TBCB	Q99426	244 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	ZNF670	Q9BS34	389 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	SP110	Q9HB58	689 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	C3orf14	Q9HBI5	128 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	PAK6	Q9NQU5	681 aa	Predicted RBP	11.29	□□□□□ -0.6
TP53-222	ENST00000617185	FNIP2	Q9P278	1114 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	SRRD	Q9UH36	339 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	MAFF	Q9ULX9	164 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185		A0A075B6Q4	140 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	ZCWPW2	A0A1B0GU75	182 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	RET	P07949	1114 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	ALAS2	P22557	587 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	RPS3	P23396	243 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
TP53-222	ENST00000617185	AVPR1A	P37288	418 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	KPNA2	P52292	529 aa	Known RBP	11.29	□□□□□ -0.6
TP53-222	ENST00000617185	MAP2K6	P52564	334 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	ELOA	Q14241	798 aa	Known RBP	11.29	□□□□□ -0.6
TP53-222	ENST00000617185	RPS6KA2	Q15349	733 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	TIGD6	Q17RP2	521 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	MORN1	Q5T089	497 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	UBXN11	Q5T124	520 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	BLOC1S3	Q6QNY0	202 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	SLC46A3	Q7Z3Q1	461 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	OR7G3	Q8NG95	312 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	CDC26	Q8NHZ8	85 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	SLC35F5	Q8WV83	523 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	HTR3C	Q8WXA8	447 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	CCDC126	Q96EE4	140 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	TRMT61A	Q96FX7	289 aa	Known RBP	11.29	□□□□□ -0.6
TP53-222	ENST00000617185	TBATA	Q96M53	351 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	C12orf57	Q99622	126 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	RHNO1	Q9BSD3	238 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	PPIL3	Q9H2H8	161 aa	Known RBP	11.29	□□□□□ -0.6
TP53-222	ENST00000617185	AKTIP	Q9H8T0	292 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	INTS7	Q9NVH2	962 aa	Known RBP	11.29	□□□□□ -0.6
TP53-222	ENST00000617185	EMC3	Q9P0I2	261 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185		A0A1W2PP18	115 aa		11.29	□□□□□ -0.6
TP53-222	ENST00000617185	RRN3P2	A6NIE6	340 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms