RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 DNASE1L1P49184 302 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 NFKB2Q00653 900 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 SLC10A7Q0GE19 358 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 OGFRL1Q5TC84 451 aaPredicted RBP10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 ZMIZ2Q8NF64 920 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 ZNF563Q8TA94 476 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 TRPM4Q8TD43 1214 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 CLEC4CQ8WTT0 213 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 C15orf40Q8WUR7 153 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 ZBED6CLQ96FA7 236 aaPredicted RBP10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 SLC35G5Q96KT7 338 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 ZSWIM3Q96MP5 696 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 MTERF1Q99551 399 aaKnown RBP10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 TMEM246Q9BRR3 403 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 FTHL17Q9BXU8 183 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 OR2B2Q9GZK3 357 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 ASAH2Q9NR71 780 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 FZD4Q9ULV1 537 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 GNB5O14775 395 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 CTSEP14091 401 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 CORO1AP31146 461 aaKnown RBP10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 HLCSP50747 726 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 OGDHQ02218 1023 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 KCNAB2Q13303 367 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 ATP6AP1Q15904 470 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 CTC1Q2NKJ3 1217 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 INO80EQ8NBZ0 244 aaPredicted RBP10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 DENND1AQ8TEH3 1009 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 FATE1Q969F0 183 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 BARD1Q99728 777 aaKnown RBP10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 CDADC1Q9BWV3 514 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 TM9SF3Q9HD45 589 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 IMP3Q9NV31 184 aaKnown RBP10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 THUMPD1Q9NXG2 353 aaKnown RBP10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 FZD1Q9UP38 647 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 SHPRHQ149N8 1683 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 A0A0J9YVX5 310 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 A0A1W2PRB8 838 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 OR51F1A6NGY5 319 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 SNAP29O95721 258 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 GSTM3P21266 225 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 RPS3P23396 243 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 ELK4P28324 431 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 PIK3CBP42338 1070 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 HCAR3P49019 387 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 CRISP3P54108 245 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 RPL6Q02878 288 aaKnown RBP10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 C4orf46Q504U0 113 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 KIAA1161Q6NSJ0 714 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 TNFAIP8L2Q6P589 184 aaPredicted RBP10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 LINGO4Q6UY18 593 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 IGDCC3Q8IVU1 814 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 SCML4Q8N228 414 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 CADM2Q8N3J6 435 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 ATAD1Q8NBU5 361 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 C12orf66Q96MD2 445 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 HAPLN3Q96S86 360 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 HTATIP2Q9BUP3 242 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 IFT27Q9BW83 186 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 BRINP2Q9C0B6 783 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 TIGARQ9NQ88 270 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 COL20A1Q9P218 1284 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 CMAHPQ9Y471 501 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 ALG5Q9Y673 324 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 PLIN4Q96Q06 1357 aa10.43□□□□□ -0.74
CLTCL1-209ENST00000617103 H7C2Y5 167 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 PDPK1O15530 556 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 SNAPC5O75971 98 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 PRH1P02810 166 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 ASGR1P07306 291 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 DUSP4Q13115 394 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 ZNF267Q14586 743 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 SOWAHAQ2M3V2 549 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 EIF5AL1Q6IS14 154 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 TLDC1Q6P9B6 456 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 OR13C4Q8NGS5 318 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 FUZQ9BT04 418 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 WACQ9BTA9 647 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 USP29Q9HBJ7 922 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 TBC1D14Q9P2M4 693 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 RIPK3Q9Y572 518 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 MAB21L2Q9Y586 359 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 PCDHGB7Q9Y5F8 929 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 ARL5AQ9Y689 179 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 IGKV6D-41A0A0C4DH26 115 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 OR2AG2A6NM03 316 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 IRF6O14896 467 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 RASAL1O95294 804 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 PIGRP01833 764 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 CSF2P04141 144 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 FUT4P22083 530 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 ERP29P30040 261 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 ECHS1P30084 290 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 DNAJB13P59910 316 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 RPS3AP61247 264 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 BTBD16Q32M84 506 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 ATP13A5Q4VNC0 1218 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 FAM46CQ5VWP2 391 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 SNX20Q7Z614 316 aa10.42□□□□□ -0.74
CLTCL1-209ENST00000617103 IQCF2Q8IXL9 164 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms