RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 CSF3RQ99062 836 aa12.78□□□□□ -0.36
FOXN3-219ENST00000615335 IGSF5Q9NSI5 407 aa12.78□□□□□ -0.36
FOXN3-219ENST00000615335 NEMP2A6NFY4 417 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 CENPXA8MT69 81 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 PRKACAP17612 351 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 IL12AP29459 219 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 CAPGP40121 348 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 NNMTP40261 264 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 RGRP47804 291 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 OR3A3P47888 321 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 DSTNP60981 165 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 PSME3P61289 254 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 GALNT3Q14435 633 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 MAPRE2Q15555 327 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 FAM83EQ2M2I3 478 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 SNAP47Q5SQN1 464 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 ZNF544Q6NX49 715 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 METTL3Q86U44 580 aaKnown RBP12.77□□□□□ -0.37
FOXN3-219ENST00000615335 BEND7Q8N7W2 519 aaPredicted RBP12.77□□□□□ -0.37
FOXN3-219ENST00000615335 WFIKKN2Q8TEU8 576 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 MARVELD3Q96A59 401 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 SLCO4A1Q96BD0 722 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 CCDC126Q96EE4 140 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 IMP4Q96G21 291 aaKnown RBP12.77□□□□□ -0.37
FOXN3-219ENST00000615335 MGME1Q9BQP7 344 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 TMEM246Q9BRR3 403 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 GON7Q9BXV9 100 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 TM6SF2Q9BZW4 377 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 EML4Q9HC35 981 aaKnown RBP12.77□□□□□ -0.37
FOXN3-219ENST00000615335 ANKHQ9HCJ1 492 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.77□□□□□ -0.37
FOXN3-219ENST00000615335 IFT80Q9P2H3 777 aaPredicted RBP12.77□□□□□ -0.37
FOXN3-219ENST00000615335 SLCO3A1Q9UIG8 710 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 HS3ST2Q9Y278 367 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 MYLKQ15746 1914 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 OR5K3A6NET4 321 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 PRRT4C9JH25 899 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 DLGAP1O14490 977 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 BMP4P12644 408 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 SRCP12931 536 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 CKMT2P17540 419 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 GSTM2P28161 218 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 GRK3P35626 688 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 CHRNA4P43681 627 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 STX5Q13190 355 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 ZFP69Q49AA0 526 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 TECRLQ5HYJ1 363 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 RBM20Q5T481 1227 aaKnown RBP12.77□□□□□ -0.37
FOXN3-219ENST00000615335 AGAP9Q5VTM2 703 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 PCDH20Q8N6Y1 951 aaKnown RBP12.77□□□□□ -0.37
FOXN3-219ENST00000615335 FAM156AQ8NDB6 213 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 OR6Q1Q8NGQ2 317 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 ARRDC2Q8TBH0 407 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 CHFRQ96EP1 664 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 MRGPRX2Q96LB1 330 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 TNKS2Q9H2K2 1166 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 CYP4F12Q9HCS2 524 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 ELOVL2Q9NXB9 296 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 ERVW-1Q9UQF0 538 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 PCDHGA7Q9Y5G6 932 aa12.77□□□□□ -0.37
FOXN3-219ENST00000615335 COL4A3Q01955 1670 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 hCG_2039718K7EN88 272 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 BNIP3LO60238 219 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 UPK1BO75841 260 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 DLGAP3O95886 979 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 EIF2DP41214 584 aaKnown RBP12.76□□□□□ -0.37
FOXN3-219ENST00000615335 TARDBPQ13148 414 aaKnown RBP eCLIP12.76□□□□□ -0.37
FOXN3-219ENST00000615335 SQLEQ14534 574 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 AGAP6Q5VW22 663 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 RANBP10Q6VN20 620 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 KCTD20Q7Z5Y7 419 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 GALNT12Q8IXK2 581 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 CBR4Q8N4T8 237 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 DHRSXQ8N5I4 330 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 PHF10Q8WUB8 498 aaKnown RBP12.76□□□□□ -0.37
FOXN3-219ENST00000615335 CYGBQ8WWM9 190 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 HTRA1Q92743 480 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 OMA1Q96E52 524 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 AGAP4Q96P64 663 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 LHPPQ9H008 270 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 DDX28Q9NUL7 540 aaKnown RBP12.76□□□□□ -0.37
FOXN3-219ENST00000615335 LHX3Q9UBR4 397 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 DGKBQ9Y6T7 804 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 VCANP13611 3396 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 CXorf51AA0A1B0GTR3 108 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 A8MT66 165 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 BET1O15155 118 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 UBDO15205 165 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 INSIG1O15503 277 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 IPO13O94829 963 aaKnown RBP12.76□□□□□ -0.37
FOXN3-219ENST00000615335 KAT7O95251 611 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 MMP2P08253 660 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 SERPINF2P08697 491 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 LTA4HP09960 611 aaKnown RBP12.76□□□□□ -0.37
FOXN3-219ENST00000615335 CFL1P23528 166 aaKnown RBP12.76□□□□□ -0.37
FOXN3-219ENST00000615335 SLC9A3P48764 834 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 FASTKQ14296 549 aaKnown RBP12.76□□□□□ -0.37
FOXN3-219ENST00000615335 MAPK11Q15759 364 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 HIST2H2ACQ16777 129 aaPredicted RBP12.76□□□□□ -0.37
FOXN3-219ENST00000615335 DGKKQ5KSL6 1271 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms