RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 UMPSP11172 480 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 BPIP17213 487 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 UGT1A6P19224 532 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 UGT1A1P22309 533 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 UGT1A4P22310 534 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 VIPR1P32241 457 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 UGT1A3P35503 534 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 UGT1A5P35504 534 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 CAPGP40121 348 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 CCT8P50990 548 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 GRSF1Q12849 480 aaKnown RBP eCLIP13.54□□□□□ -0.24
COPS7B-223ENST00000611614 TRAF3Q13114 568 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 GPR33Q49SQ1 333 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 NANOGP8Q6NSW7 305 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 IFNEQ86WN2 208 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 CHPFQ8IZ52 775 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 ZBTB2Q8N680 514 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 ZBTB8BQ8NAP8 495 aaPredicted RBP13.54□□□□□ -0.24
COPS7B-223ENST00000611614 TMIEQ8NEW7 156 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 CHFRQ96EP1 664 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 PHF12Q96QT6 1004 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 P2RY13Q9BPV8 354 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 RPF2Q9H7B2 306 aaKnown RBP13.54□□□□□ -0.24
COPS7B-223ENST00000611614 NANOGQ9H9S0 305 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 SLAMF8Q9P0V8 285 aa13.54□□□□□ -0.24
COPS7B-223ENST00000611614 TRIOBPQ9H2D6 2365 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 RNF103-CHMP3A0A140T963 221 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 TCRBV5S2A0A599 114 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 TSPAN11A1L157 253 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 ANHXE9PGG2 379 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 LSM1O15116 133 aaKnown RBP13.53□□□□□ -0.24
COPS7B-223ENST00000611614 NPC1O15118 1278 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 CLOCKO15516 846 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 KATNA1O75449 491 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 GUCA1CO95843 209 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 ENO2P09104 434 aaPredicted RBP13.53□□□□□ -0.24
COPS7B-223ENST00000611614 BMP1P13497 986 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 MSH3P20585 1137 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 TPP2P29144 1249 aaPredicted RBP13.53□□□□□ -0.24
COPS7B-223ENST00000611614 HSPA7P48741 367 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 PTSQ03393 145 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 NR6A1Q15406 480 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 CHRNA6Q15825 494 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 AASDHQ4L235 1098 aaPredicted RBP13.53□□□□□ -0.24
COPS7B-223ENST00000611614 C9orf64Q5T6V5 341 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 GPRC6AQ5T6X5 926 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 MACC1Q6ZN28 852 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 PRR23BQ6ZRT6 265 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 HID1Q8IV36 788 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 DHRSXQ8N5I4 330 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 CLDN19Q8N6F1 224 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 VOPP1Q96AW1 172 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 COX4I2Q96KJ9 171 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 TMEM245Q9H330 911 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 PCDH12Q9NPG4 1184 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 RAD18Q9NS91 495 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 ANKRD12Q6UB98 2062 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 C1QTNF3-AMACRE9PGA6 284 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 ARNTLO00327 626 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 IFRD1O00458 451 aaPredicted RBP13.53□□□□□ -0.24
COPS7B-223ENST00000611614 INPP4BO15327 924 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 G6PDP11413 515 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 MTHFD1P11586 935 aaKnown RBP13.53□□□□□ -0.24
COPS7B-223ENST00000611614 TIMP2P16035 220 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 HTR1EP28566 365 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 OXTRP30559 389 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 ABRAXAS2Q15018 415 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 CYP51A1Q16850 503 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 AAK1Q2M2I8 961 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 SULT1C3Q6IMI6 304 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 SLC2A7Q6PXP3 512 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 CYP20A1Q6UW02 462 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 PAPD5Q8NDF8 572 aaKnown RBP13.53□□□□□ -0.24
COPS7B-223ENST00000611614 TMEM74Q96NL1 305 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 EGFL8Q99944 293 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 INTS7Q9NVH2 962 aaKnown RBP13.53□□□□□ -0.24
COPS7B-223ENST00000611614 ANGPTL3Q9Y5C1 460 aa13.53□□□□□ -0.24
COPS7B-223ENST00000611614 H3BMQ9 156 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 MAGEB3O15480 346 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 LHCGRP22888 699 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 IL12RB1P42701 662 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 SOX9P48436 509 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 AP5B1Q2VPB7 878 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 SLC44A4Q53GD3 710 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 HABP4Q5JVS0 413 aaKnown RBP13.52□□□□□ -0.24
COPS7B-223ENST00000611614 SFTPA1Q8IWL2 248 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 TBC1D21Q8IYX1 336 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 NXPE1Q8N323 547 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 GIPC3Q8TF64 312 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 UBTD2Q8WUN7 234 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 SNRNP27Q8WVK2 155 aaKnown RBP13.52□□□□□ -0.24
COPS7B-223ENST00000611614 PPP3R2Q96LZ3 170 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 COG8Q96MW5 612 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 CD244Q9BZW8 370 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 SMPD3Q9NY59 655 aaPredicted RBP13.52□□□□□ -0.24
COPS7B-223ENST00000611614 FADS3Q9Y5Q0 445 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 CROCCQ5TZA2 2017 aa13.52□□□□□ -0.24
COPS7B-223ENST00000611614 BRWD1Q9NSI6 2320 aa13.52□□□□□ -0.25
COPS7B-223ENST00000611614 FAM149AA5PLN7 773 aa13.52□□□□□ -0.25
COPS7B-223ENST00000611614 NCK1P16333 377 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms