RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ATG9BQ674R7 924 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 GLYATQ6IB77 296 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 TMEM220Q6QAJ8 160 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 AGTRAPQ6RW13 159 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 SUSD1Q6UWL2 747 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 TMC5Q6UXY8 1006 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 AMIGO2Q86SJ2 522 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 THOC6Q86W42 341 aaKnown RBP11.62□□□□□ -0.55
USP6NL-206ENST00000609853 BEND7Q8N7W2 519 aaPredicted RBP11.62□□□□□ -0.55
USP6NL-206ENST00000609853 OR56A3Q8NH54 315 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 NXPE3Q969Y0 559 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 NUS1Q96E22 293 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 ITCHQ96J02 903 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 LINC00615Q96LM1 132 aaPredicted RBP11.62□□□□□ -0.55
USP6NL-206ENST00000609853 TMEM245Q9H330 911 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 ZNF696Q9H7X3 374 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 BRF2Q9HAW0 419 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 GPR34Q9UPC5 381 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 C2orf16Q68DN1 1984 aa11.62□□□□□ -0.55
USP6NL-206ENST00000609853 TCF20Q9UGU0 1960 aaKnown RBP11.61□□□□□ -0.55
USP6NL-206ENST00000609853 HEPACAM2A8MVW5 462 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 C1QTNF3-AMACRE9PGA6 284 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 H3BM21 787 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 VEGFDO43915 354 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 ANXA6P08133 673 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 CDH1P12830 882 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 ADRB3P13945 408 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 MYOGP15173 224 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 GGT1P19440 569 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 ITPKAP23677 461 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 S100A3P33764 101 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 CCT8P50990 548 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 POLE2P56282 527 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 C21orf58P58505 322 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 YBX1P67809 324 aaKnown RBP11.61□□□□□ -0.55
USP6NL-206ENST00000609853 ABRQ12979 859 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 GTF2H3Q13889 308 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 E2F2Q14209 437 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 ADRM1Q16186 407 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 ZNF658BQ4V348 819 aaPredicted RBP11.61□□□□□ -0.55
USP6NL-206ENST00000609853 RUNDC3AQ59EK9 446 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 SPANXN4Q5MJ08 99 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 GRHL2Q6ISB3 625 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 SPRED2Q7Z698 418 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 CPA6Q8N4T0 437 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 TERB1Q8NA31 727 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 OR2T12Q8NG77 320 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 FGF13Q92913 245 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 ARRDC3Q96B67 414 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 PYCR2Q96C36 320 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 BIRC7Q96CA5 298 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 REPS1Q96D71 796 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 MTFMTQ96DP5 389 aaKnown RBP11.61□□□□□ -0.55
USP6NL-206ENST00000609853 ZNF583Q96ND8 569 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 HHIPQ96QV1 700 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 CIB1Q99828 191 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 WRAP53Q9BUR4 548 aaKnown RBP11.61□□□□□ -0.55
USP6NL-206ENST00000609853 BDH2Q9BUT1 245 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 HDAC8Q9BY41 377 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 ATG10Q9H0Y0 220 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 TRIM39Q9HCM9 518 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 VAPAQ9P0L0 249 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 STOX2Q9P2F5 926 aaPredicted RBP11.61□□□□□ -0.55
USP6NL-206ENST00000609853 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.61□□□□□ -0.55
USP6NL-206ENST00000609853 PCDHGA11Q9Y5H2 935 aa11.61□□□□□ -0.55
USP6NL-206ENST00000609853 TRBV5-3A0A0A0MS03 114 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 C7orf72A4D263 438 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 SPINT1O43278 529 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 LZTS3O60299 673 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 RECQL5O94762 991 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 SCELO95171 688 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 LDLRP01130 860 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 MTHFD1P11586 935 aaKnown RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 AMD1P17707 334 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 HRH2P25021 359 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 EIF2DP41214 584 aaKnown RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 GPR1P46091 355 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 SLC6A11P48066 632 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 OR4D2P58180 307 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 SRSF11Q05519 484 aaKnown RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 CYP4F3Q08477 520 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 ZNF234Q14588 700 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 NRF1Q16656 503 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 POM121L1PQ3SYA9 428 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 FAM98BQ52LJ0 330 aaKnown RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 XKR6Q5GH73 641 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 C6orf52Q5T4I8 152 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 FAM46CQ5VWP2 391 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 NOXRED1Q6NXP6 359 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 NUDT18Q6ZVK8 323 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 ERN2Q76MJ5 926 aaKnown RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 SPRED1Q7Z699 444 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 ADGRD2Q7Z7M1 963 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 CHERPQ8IWX8 916 aaKnown RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 RIMKLAQ8IXN7 391 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 TMEM132CQ8N3T6 1108 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 C12orf76Q8N812 135 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-206ENST00000609853 ZNF366Q8N895 744 aa11.6□□□□□ -0.55
USP6NL-206ENST00000609853 WDR20Q8TBZ3 569 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms