RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 F8W8V4 182 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 RASGRF2O14827 1237 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 KLHL41O60662 606 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 IPO13O94829 963 aaKnown RBP17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 CLDN1O95832 211 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 GAS8O95995 478 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 IFNB1P01574 187 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 ALBP02768 609 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 AIMP2Q13155 320 aaKnown RBP17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 CYP2A13Q16696 494 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 KIRREL2Q6UWL6 708 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 PPP1R21Q6ZMI0 780 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 CFAP61Q8NHU2 1237 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 C1orf54Q8WWF1 131 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 SLC22A18Q96BI1 424 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 SLC6A20Q9NP91 592 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 RAB6BQ9NRW1 208 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 IRAK4Q9NWZ3 460 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 FBXL4Q9UKA2 621 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 KLK4Q9Y5K2 254 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 CSAG2Q9Y5P2 127 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 HS3ST3B1Q9Y662 390 aa17.25■□□□□ 0.35
CHMP2A-208ENST00000601220 VSTM2BA6NLU5 285 aa17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 PRMT5O14744 637 aaPredicted RBP17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 DSCR3O14972 297 aa17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 CTSVO60911 334 aa17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 ALOX12BO75342 701 aa17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 MED26O95402 600 aa17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 RPN2P04844 631 aa17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 APOA4P06727 396 aa17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 CCSMST1Q4G0I0 132 aa17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 YOD1Q5VVQ6 348 aaPredicted RBP17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 TAX1BP1Q86VP1 789 aa17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 SLC13A5Q86YT5 568 aaPredicted RBP17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 ZADH2Q8N4Q0 377 aa17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 DTWD1Q8N5C7 304 aa17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 ILKAPQ9H0C8 392 aaPredicted RBP17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 TREX1Q9NSU2 369 aa17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 CUTCQ9NTM9 273 aa17.24■□□□□ 0.35
CHMP2A-208ENST00000601220 TARM1B6A8C7 271 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 C1orf105O95561 183 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 ZSCAN5DPP0CG00 497 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 COL8A1P27658 744 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 RPL22P35268 128 aaKnown RBP17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 PPARGP37231 505 aaPredicted RBP17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 PRAMEP78395 509 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 SIX1Q15475 284 aaPredicted RBP17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 SF1Q15637 639 aaKnown RBP17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 ZC3H12BQ5HYM0 836 aaKnown RBP17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 PCID2Q5JVF3 399 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 PRAMEF13Q5VWM6 474 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 RNF10Q8N5U6 811 aaKnown RBP17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 HMGCLL1Q8TB92 370 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 DENND1AQ8TEH3 1009 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 TM9SF4Q92544 642 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 ZUFSPQ96AP4 578 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 MESP1Q9BRJ9 268 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 TSSK1BQ9BXA7 367 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 CATSPERZQ9NTU4 200 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 CTSFQ9UBX1 484 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 ZNF148Q9UQR1 794 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 COPG1Q9Y678 874 aaKnown RBP17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 NFS1Q9Y697 457 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 CCDC88CQ9P219 2028 aa17.23■□□□□ 0.35
CHMP2A-208ENST00000601220 A0A1W2PPV9 198 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 KRT87PA6NCN2 255 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 ANKUB1A6NFN9 424 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 E7EVH7 732 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 CD3EAPO15446 510 aaKnown RBP17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 NRP2O60462 931 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 SNRNP200O75643 2136 aaKnown RBP17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 FKBP9O95302 570 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 APRTP07741 180 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 PIM1P11309 404 aaPredicted RBP17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 RPS3P23396 243 aaKnown RBP eCLIP17.22■□□□□ 0.353e-6■■■□□ 16.9
CHMP2A-208ENST00000601220 ITGA3P26006 1051 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 OR1D4P47884 311 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 Q0VFX4 171 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 GRM7Q14831 915 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 HIF1AQ16665 826 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 AARS2Q5JTZ9 985 aaKnown RBP17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 TCTE1Q5JU00 501 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 MAMDC2Q7Z304 686 aaPredicted RBP17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 WDR77Q9BQA1 342 aaPredicted RBP17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 INTS7Q9NVH2 962 aaKnown RBP17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 CDC23Q9UJX2 597 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 SLC39A10Q9ULF5 831 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 SLC5A6Q9Y289 635 aa17.22■□□□□ 0.35
CHMP2A-208ENST00000601220 LOC105369274A0A096LPK9 316 aa17.21■□□□□ 0.35
CHMP2A-208ENST00000601220 LOC102723532A0A0G2JNH3 316 aa17.21■□□□□ 0.35
CHMP2A-208ENST00000601220 SRPX2O60687 465 aaPredicted RBP17.21■□□□□ 0.35
CHMP2A-208ENST00000601220 ARNTP27540 789 aa17.21■□□□□ 0.35
CHMP2A-208ENST00000601220 PSMB5P28074 263 aa17.21■□□□□ 0.35
CHMP2A-208ENST00000601220 GLRBP48167 497 aa17.21■□□□□ 0.35
CHMP2A-208ENST00000601220 TTPAP49638 278 aa17.21■□□□□ 0.35
CHMP2A-208ENST00000601220 YBX1P67809 324 aaKnown RBP17.21■□□□□ 0.35
CHMP2A-208ENST00000601220 CRADDP78560 199 aa17.21■□□□□ 0.35
CHMP2A-208ENST00000601220 SNX1Q13596 522 aa17.21■□□□□ 0.35
CHMP2A-208ENST00000601220 CTSL3PQ5NE16 218 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms