RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 KIF1CO43896 1103 aaKnown RBP21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 KERAO60938 352 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 SUPT3HO75486 399 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 C9P02748 559 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 RBP1P09455 135 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 ERGP11308 486 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 UGT2B7P16662 529 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 PRDX3P30048 256 aaKnown RBP21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 RPA3P35244 121 aaPredicted RBP21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 CDKL1Q00532 357 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 TAP2Q03519 686 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 FOXC1Q12948 553 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 TGFBIQ15582 683 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 ISXQ2M1V0 245 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 CACHD1Q5VU97 1274 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 SUSD1Q6UWL2 747 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 HDXQ7Z353 690 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 RAB44Q7Z6P3 723 aaPredicted RBP21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 B3GNT8Q7Z7M8 397 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 SLITRK4Q8IW52 837 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 FBXL8Q96CD0 374 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 MED8Q96G25 268 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 DCDC2Q9UHG0 476 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 POMT2Q9UKY4 750 aa21.38■■□□□ 1.01
CHMP2A-204ENST00000597848 CCDC189A1A4V9 331 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 FAM149AA5PLN7 773 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 SYCE1LA8MT33 242 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 AGRPO00253 132 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 KRT4P19013 534 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 CDH3P22223 829 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 OAS2P29728 719 aaKnown RBP21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 ZFP36L1Q07352 338 aaKnown RBP21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 NAE1Q13564 534 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 SF1Q15637 639 aaKnown RBP21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 THEMIS2Q5TEJ8 643 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 TRABD2AQ86V40 505 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 SRRM1Q8IYB3 904 aaKnown RBP21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 C4orf33Q8N1A6 199 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 DCBLD1Q8N8Z6 715 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 RHEBL1Q8TAI7 183 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 OR2A14Q96R47 310 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 CD180Q99467 661 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 MAP3K3Q99759 626 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 STRADBQ9C0K7 418 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 PDP2Q9P2J9 529 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 CFAP54Q96N23 3096 aa21.37■■□□□ 1.01
CHMP2A-204ENST00000597848 UBXN8O00124 270 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 GSTA1P08263 222 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 THRAP10827 490 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 PEBP1P30086 187 aaKnown RBP21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 CCT5P48643 541 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 TARDBPQ13148 414 aaKnown RBP eCLIP21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 TECRLQ5HYJ1 363 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 SPESP1Q6UW49 350 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 TMPRSS7Q7RTY8 843 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 TRIM73Q86UV7 250 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 LCA5Q86VQ0 697 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 RCBTB1Q8NDN9 531 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 PPM1MQ96MI6 270 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 ATOH8Q96SQ7 321 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 ACAT2Q9BWD1 397 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 CCDC177Q9NQR7 707 aaPredicted RBP21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 NUDT4Q9NZJ9 180 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 PCDHB11Q9Y5F2 797 aa21.36■■□□□ 1.01
CHMP2A-204ENST00000597848 TLCD2A6NGC4 264 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 GOLGA6L10A6NI86 522 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 COPEO14579 308 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 HYAL3O43820 417 aaPredicted RBP21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 MYZAPP0CAP1 466 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 PSMB5P28074 263 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 CCKBRP32239 447 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 ARL4DP49703 201 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 SEPHS1P49903 392 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 HNMTP50135 292 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 PDX1P52945 283 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 TRA2AQ13595 282 aaKnown RBP eCLIP21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 CDKL4Q5MAI5 379 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 SULT1C3Q6IMI6 304 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 C16orf46Q6P387 395 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 SH2D5Q6ZV89 423 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 MARCH9Q86YJ5 346 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 FAM20CQ8IXL6 584 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 LRRC56Q8IYG6 542 aaPredicted RBP21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 CACTIN-AS1Q8N1I8 211 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 RHBDF1Q96CC6 855 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 MRPL57Q9BQC6 102 aaKnown RBP21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 KLHL25Q9H0H3 589 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 MRPL46Q9H2W6 279 aaKnown RBP21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 C1GALT1Q9NS00 363 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 WWOXQ9NZC7 414 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 AKAP7Q9P0M2 348 aaPredicted RBP21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 TMEM216Q9P0N5 145 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 CPSF2Q9P2I0 782 aaKnown RBP21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 XPR1Q9UBH6 696 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 TAC3Q9UHF0 121 aa21.35■■□□□ 1.01
CHMP2A-204ENST00000597848 A0A1W2PPV9 198 aa21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 TOX3O15405 576 aaPredicted RBP21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 GLRA3O75311 464 aa21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 GFAPP14136 432 aa21.34■■□□□ 1.01
CHMP2A-204ENST00000597848 TBPL1P62380 186 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms