RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 SEPHS1P49903 392 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 PNLIPRP1P54315 467 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 ATP6V0D1P61421 351 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 DLG1Q12959 904 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 EIF3IQ13347 325 aaKnown RBP18.66■□□□□ 0.58
PNKP-207ENST00000596014 FASTKQ14296 549 aaKnown RBP18.66■□□□□ 0.58
PNKP-207ENST00000596014 TSNQ15631 228 aaKnown RBP18.66■□□□□ 0.58
PNKP-207ENST00000596014 SPESP1Q6UW49 350 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 TAX1BP1Q86VP1 789 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 AGBL5Q8NDL9 886 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 WDR36Q8NI36 951 aaKnown RBP18.66■□□□□ 0.58
PNKP-207ENST00000596014 KLHL6Q8WZ60 621 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 ZNF768Q9H5H4 540 aaKnown RBP18.66■□□□□ 0.58
PNKP-207ENST00000596014 C1GALT1Q9NS00 363 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 PSMC3IPQ9P2W1 217 aaPredicted RBP18.66■□□□□ 0.58
PNKP-207ENST00000596014 SATB2Q9UPW6 733 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 A0A087X1B8 175 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 TRABD2BA6NFA1 517 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 PRICKLE3O43900 615 aaPredicted RBP18.66■□□□□ 0.58
PNKP-207ENST00000596014 NUDT17P0C025 328 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 AP1S2P56377 157 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 PPP1R3AQ16821 1122 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 TAF1BQ53T94 588 aaPredicted RBP18.66■□□□□ 0.58
PNKP-207ENST00000596014 C3orf38Q5JPI3 329 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 MBOAT1Q6ZNC8 495 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 ADAMTSL2Q86TH1 951 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 SYTL1Q8IYJ3 562 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 CARFQ8N187 725 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 FBXO39Q8N4B4 442 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 OR2W6PQ8NHA6 318 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 SLC22A18Q96BI1 424 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 MTBPQ96DY7 904 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 PITPNM3Q9BZ71 974 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 NRSN2Q9GZP1 204 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 PPCSQ9HAB8 311 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 NMRAL1Q9HBL8 299 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 IGSF5Q9NSI5 407 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 ARL15Q9NXU5 204 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 UTP6Q9NYH9 597 aaKnown RBP18.66■□□□□ 0.58
PNKP-207ENST00000596014 AKAP7Q9P0M2 348 aaPredicted RBP18.66■□□□□ 0.58
PNKP-207ENST00000596014 TBK1Q9UHD2 729 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 LOXL2Q9Y4K0 774 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 CHD8Q9HCK8 2581 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 IQANK1A0A1B0GTG1 560 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 A0A1W2PPV9 198 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 PMS2P1A4D2B8 440 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 GOLGA6L10A6NI86 522 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 ZNF839A8K0R7 811 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 E7ENX8 843 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 MPOP05164 745 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 LTA4HP09960 611 aaKnown RBP18.65■□□□□ 0.58
PNKP-207ENST00000596014 HGFP14210 728 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 CDH3P22223 829 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 IMPA1P29218 277 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 LSSP48449 732 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 IRF9Q00978 393 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 TAP2Q03519 686 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 ZNF771Q7L3S4 317 aaPredicted RBP18.65■□□□□ 0.58
PNKP-207ENST00000596014 CENPLQ8N0S6 344 aaPredicted RBP18.65■□□□□ 0.58
PNKP-207ENST00000596014 PPFIBP2Q8ND30 876 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 KCTD4Q8WVF5 259 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 SMPDL3AQ92484 453 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 PTERQ96BW5 349 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 NXNL1Q96CM4 212 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 VPS11Q9H270 941 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 TMBIM4Q9HC24 238 aa18.65■□□□□ 0.58
PNKP-207ENST00000596014 STOX2Q9P2F5 926 aaPredicted RBP18.65■□□□□ 0.58
PNKP-207ENST00000596014 FRYQ5TBA9 3013 aa18.64■□□□□ 0.58
PNKP-207ENST00000596014 PABPN1LA6NDY0 278 aaKnown RBP18.64■□□□□ 0.57
PNKP-207ENST00000596014 SLC9B1P1A6NJY1 282 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 PLD2O14939 933 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 GUCA1CO95843 209 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 SLCO1A2P46721 670 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 SF1Q15637 639 aaKnown RBP18.64■□□□□ 0.57
PNKP-207ENST00000596014 FOXR1Q6PIV2 292 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 SUSD1Q6UWL2 747 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 TIFABQ6ZNK6 161 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 ISCA2Q86U28 154 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 TRIM73Q86UV7 250 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 TDRPQ86YL5 185 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 LRRC56Q8IYG6 542 aaPredicted RBP18.64■□□□□ 0.57
PNKP-207ENST00000596014 CNPY4Q8N129 248 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 EPS8L3Q8TE67 593 aaKnown RBP18.64■□□□□ 0.57
PNKP-207ENST00000596014 KIAA1191Q96A73 305 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 SLC41A2Q96JW4 573 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 ATP6V1G3Q96LB4 118 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 POLR1BQ9H9Y6 1135 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 OCIAD1Q9NX40 245 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 OARD1Q9Y530 152 aa18.64■□□□□ 0.57
PNKP-207ENST00000596014 HMGB1P1B2RPK0 211 aaPredicted RBP18.63■□□□□ 0.57
PNKP-207ENST00000596014 RFPL1O75677 317 aa18.63■□□□□ 0.57
PNKP-207ENST00000596014 KLHL2O95198 593 aa18.63■□□□□ 0.57
PNKP-207ENST00000596014 ZBTB11O95625 1053 aaPredicted RBP18.63■□□□□ 0.57
PNKP-207ENST00000596014 CCL4P13236 92 aa18.63■□□□□ 0.57
PNKP-207ENST00000596014 NELFEP18615 380 aaKnown RBP18.63■□□□□ 0.57
PNKP-207ENST00000596014 GABREP78334 506 aa18.63■□□□□ 0.57
PNKP-207ENST00000596014 RTP5Q14D33 572 aa18.63■□□□□ 0.57
PNKP-207ENST00000596014 RASA2Q15283 850 aa18.63■□□□□ 0.57
PNKP-207ENST00000596014 OR4D1Q15615 310 aa18.63■□□□□ 0.57
PNKP-207ENST00000596014 SLC5A12Q1EHB4 618 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms