RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 TTPAP49638 278 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 PRAMEP78395 509 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 GRB7Q14451 532 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 OASLQ15646 514 aaKnown RBP14.4□□□□□ -0.1
VAPA-209ENST00000585042 NKG7Q16617 165 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 AGAP7PQ5VUJ5 663 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 NAPRTQ6XQN6 538 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 TTLL10Q6ZVT0 673 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 MICALCLQ6ZW33 695 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 LMNTD1Q8N9Z9 388 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 OR6P1Q8NGX9 317 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 PPP4R1Q8TF05 950 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 RAD51AP1Q96B01 352 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 C5orf34Q96MH7 638 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 AGAP4Q96P64 663 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 PANX3Q96QZ0 392 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 SEMA3GQ9NS98 782 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.4□□□□□ -0.1
VAPA-209ENST00000585042 ERRFI1Q9UJM3 462 aaPredicted RBP14.4□□□□□ -0.1
VAPA-209ENST00000585042 SLC39A10Q9ULF5 831 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 PLAGL1Q9UM63 463 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 PCDHGA10Q9Y5H3 936 aa14.4□□□□□ -0.1
VAPA-209ENST00000585042 NBPF19A0A087WUL8 3843 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 PCM1Q15154 2024 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 E7EVH7 732 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 AP3B1O00203 1094 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 PRMT5O14744 637 aaPredicted RBP14.39□□□□□ -0.11
VAPA-209ENST00000585042 LIASO43766 372 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 PRICKLE3O43900 615 aaPredicted RBP14.39□□□□□ -0.11
VAPA-209ENST00000585042 RNF224P0DH78 156 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 ITGA3P26006 1051 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 GLRBP48167 497 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 TMED2Q15363 201 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 SF1Q15637 639 aaKnown RBP14.39□□□□□ -0.11
VAPA-209ENST00000585042 IRAK1BP1Q5VVH5 260 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 HIST2H2BCQ6DN03 193 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 ZNF534Q76KX8 674 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 CUZD1Q86UP6 607 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 LRRC6Q86X45 466 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 VRK3Q8IV63 474 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 MPP5Q8N3R9 675 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 RAB42Q8N4Z0 105 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 RNF10Q8N5U6 811 aaKnown RBP14.39□□□□□ -0.11
VAPA-209ENST00000585042 TTC29Q8NA56 475 aaPredicted RBP14.39□□□□□ -0.11
VAPA-209ENST00000585042 ST6GALNAC3Q8NDV1 305 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 ACRBPQ8NEB7 543 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 GSDMBQ8TAX9 411 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 HMGCLL1Q8TB92 370 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 WDR77Q9BQA1 342 aaPredicted RBP14.39□□□□□ -0.11
VAPA-209ENST00000585042 CUTCQ9NTM9 273 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 SLC2A6Q9UGQ3 507 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 CDC23Q9UJX2 597 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 FBXL4Q9UKA2 621 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 PACSIN2Q9UNF0 486 aaPredicted RBP14.39□□□□□ -0.11
VAPA-209ENST00000585042 TCAF1Q9Y4C2 921 aa14.39□□□□□ -0.11
VAPA-209ENST00000585042 SNRNP200O75643 2136 aaKnown RBP14.39□□□□□ -0.11
VAPA-209ENST00000585042 TCRBV7S2A1N4TA0A589 114 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 VSTM2BA6NLU5 285 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 SOCS6O14544 535 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 CCNFP41002 786 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 SLC9A5Q14940 896 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 NAA25Q14CX7 972 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 PCID2Q5JVF3 399 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 B3GNTL1Q67FW5 361 aaPredicted RBP14.38□□□□□ -0.11
VAPA-209ENST00000585042 FCRL6Q6DN72 434 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 PRMT9Q6P2P2 845 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 KIRREL2Q6UWL6 708 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 C4orf22Q6V702 233 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 CFAP61Q8NHU2 1237 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 MAGEC3Q8TD91 643 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 ANP32BQ92688 251 aaKnown RBP14.38□□□□□ -0.11
VAPA-209ENST00000585042 INPP5DQ92835 1189 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 ZNF778Q96MU6 729 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 LMF1Q96S06 567 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 SPSB2Q99619 263 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 LHPPQ9H008 270 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 SLC6A20Q9NP91 592 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 CATSPERZQ9NTU4 200 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 PAK5Q9P286 719 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 ZNF148Q9UQR1 794 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 NUP210LQ5VU65 1888 aa14.38□□□□□ -0.11
VAPA-209ENST00000585042 CENPEQ02224 2701 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 ITPR2Q14571 2701 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 CD3EAPO15446 510 aaKnown RBP14.37□□□□□ -0.11
VAPA-209ENST00000585042 CLDN1O95832 211 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 FTCDO95954 541 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 RPS3P23396 243 aaKnown RBP eCLIP14.37□□□□□ -0.111e-18■■■□□ 15.9
VAPA-209ENST00000585042 GRIA1P42261 906 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 GRIA3P42263 894 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 TSFMP43897 325 aaKnown RBP14.37□□□□□ -0.11
VAPA-209ENST00000585042 CARSP49589 748 aaKnown RBP14.37□□□□□ -0.11
VAPA-209ENST00000585042 EMP3P54852 163 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 CSE1LP55060 971 aaKnown RBP14.37□□□□□ -0.11
VAPA-209ENST00000585042 TUBB8Q3ZCM7 444 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 PTRHD1Q6GMV3 140 aaKnown RBP14.37□□□□□ -0.11
VAPA-209ENST00000585042 COX15Q7KZN9 410 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 KCNMB4Q86W47 210 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 FAM20CQ8IXL6 584 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 TAB3Q8N5C8 712 aaPredicted RBP14.37□□□□□ -0.11
VAPA-209ENST00000585042 PPHLN1Q8NEY8 458 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms