RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 GPR34Q9UPC5 381 aa22.03■■□□□ 1.12
CCDC47-204ENST00000582252 CKAP5Q14008 2032 aa22.02■■□□□ 1.12
CCDC47-204ENST00000582252 C17orf113A0A1B0GUU1 675 aa22.02■■□□□ 1.12
CCDC47-204ENST00000582252 CLGNO14967 610 aa22.02■■□□□ 1.12
CCDC47-204ENST00000582252 RNASEH1O60930 286 aaKnown RBP22.02■■□□□ 1.12
CCDC47-204ENST00000582252 IL6P05231 212 aa22.02■■□□□ 1.12
CCDC47-204ENST00000582252 ACPPP15309 386 aa22.02■■□□□ 1.12
CCDC47-204ENST00000582252 P2RY2P41231 377 aa22.02■■□□□ 1.12
CCDC47-204ENST00000582252 IRF8Q02556 426 aa22.02■■□□□ 1.12
CCDC47-204ENST00000582252 CHIT1Q13231 466 aa22.02■■□□□ 1.12
CCDC47-204ENST00000582252 LCN8Q6JVE9 175 aa22.02■■□□□ 1.12
CCDC47-204ENST00000582252 AGTRAPQ6RW13 159 aa22.02■■□□□ 1.12
CCDC47-204ENST00000582252 KCTD14Q9BQ13 255 aaPredicted RBP22.02■■□□□ 1.12
CCDC47-204ENST00000582252 ACPTQ9BZG2 426 aa22.02■■□□□ 1.12
CCDC47-204ENST00000582252 OR2AG1Q9H205 316 aa22.02■■□□□ 1.12
CCDC47-204ENST00000582252 STOX2Q9P2F5 926 aaPredicted RBP22.02■■□□□ 1.12
CCDC47-204ENST00000582252 FADS3Q9Y5Q0 445 aa22.02■■□□□ 1.12
CCDC47-204ENST00000582252 KCNH1O95259 989 aa22.01■■□□□ 1.11
CCDC47-204ENST00000582252 GALK1P51570 392 aa22.01■■□□□ 1.11
CCDC47-204ENST00000582252 CSTF3Q12996 717 aaKnown RBP22.01■■□□□ 1.11
CCDC47-204ENST00000582252 PWP1Q13610 501 aa22.01■■□□□ 1.11
CCDC47-204ENST00000582252 BLMHQ13867 455 aa22.01■■□□□ 1.11
CCDC47-204ENST00000582252 ZXDCQ2QGD7 858 aaPredicted RBP22.01■■□□□ 1.11
CCDC47-204ENST00000582252 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.01■■□□□ 1.11
CCDC47-204ENST00000582252 FRG2Q64ET8 278 aa22.01■■□□□ 1.11
CCDC47-204ENST00000582252 ANO7Q6IWH7 933 aa22.01■■□□□ 1.11
CCDC47-204ENST00000582252 CYP2R1Q6VVX0 501 aa22.01■■□□□ 1.11
CCDC47-204ENST00000582252 SFTPA1Q8IWL2 248 aa22.01■■□□□ 1.11
CCDC47-204ENST00000582252 DNAJB8Q8NHS0 232 aa22.01■■□□□ 1.11
CCDC47-204ENST00000582252 MTFMTQ96DP5 389 aaKnown RBP22.01■■□□□ 1.11
CCDC47-204ENST00000582252 SLC45A3Q96JT2 553 aa22.01■■□□□ 1.11
CCDC47-204ENST00000582252 FRG2BQ96QU4 278 aa22.01■■□□□ 1.11
CCDC47-204ENST00000582252 PIAS3Q9Y6X2 628 aa22.01■■□□□ 1.11
CCDC47-204ENST00000582252 ASGR2P07307 311 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 HNF4AP41235 474 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 GRIA3P42263 894 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 TNFRSF4P43489 277 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 USP39Q53GS9 565 aaKnown RBP22■■□□□ 1.11
CCDC47-204ENST00000582252 SFT2D3Q587I9 215 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 EGFLAMQ63HQ2 1017 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 SLC2A7Q6PXP3 512 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 HM13Q8TCT9 377 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 SLC13A3Q8WWT9 602 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 HIC2Q96JB3 615 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 PKP2Q99959 881 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 Q9H521 79 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 AP3M1Q9Y2T2 418 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 SNX13Q9Y5W8 968 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 KANSL1LA0AUZ9 987 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 PLK4O00444 970 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 AP1G1O43747 822 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 UQCRBP14927 111 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 GLULP15104 373 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 IL9P15248 144 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 GSK3BP49841 420 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 RPS14P62263 151 aaKnown RBP22■■□□□ 1.11
CCDC47-204ENST00000582252 LIPEQ05469 1076 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 PCDH1Q08174 1060 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 CNTN1Q12860 1018 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 ZNF658BQ4V348 819 aaPredicted RBP22■■□□□ 1.11
CCDC47-204ENST00000582252 NANOGP8Q6NSW7 305 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 PTRH1Q86Y79 214 aaKnown RBP22■■□□□ 1.11
CCDC47-204ENST00000582252 CFAP206Q8IYR0 622 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 MSANTD3Q96H12 275 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 CLMPQ9H6B4 373 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 NANOGQ9H9S0 305 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 GPRC5BQ9NZH0 403 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 STON1Q9Y6Q2 735 aa22■■□□□ 1.11
CCDC47-204ENST00000582252 MAGEA13PA6NCF6 341 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 LILRB5O75023 590 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 ADH1BP00325 375 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 HTR1EP28566 365 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 BDKRB1P46663 353 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 HSPA13P48723 471 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 PNLIPRP1P54315 467 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 AQP4P55087 323 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 NAE1Q13564 534 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 TDGQ13569 410 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 PTGR1Q14914 329 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 KIAA0040Q15053 153 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 XKR6Q5GH73 641 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 ADAMTSL4Q6UY14 1074 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 PROSER1Q86XN7 944 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 OR56A3Q8NH54 315 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 MAFAQ8NHW3 353 aaPredicted RBP21.99■■□□□ 1.11
CCDC47-204ENST00000582252 MED8Q96G25 268 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 DPEP2Q9H4A9 486 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 ARMC1Q9NVT9 282 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 ATXN10Q9UBB4 475 aa21.99■■□□□ 1.11
CCDC47-204ENST00000582252 CNOT11Q9UKZ1 510 aaKnown RBP21.99■■□□□ 1.11
CCDC47-204ENST00000582252 K7ESM1 405 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 RNASEH2AO75792 299 aaKnown RBP21.98■■□□□ 1.11
CCDC47-204ENST00000582252 C1orf105O95561 183 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 SRFP11831 508 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 BCKDHAP12694 445 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 HSD3B1P14060 373 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 ATP6V1B2P21281 511 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 IL10P22301 178 aa21.98■■□□□ 1.11
CCDC47-204ENST00000582252 PSMA4P25789 261 aaKnown RBP21.98■■□□□ 1.11
CCDC47-204ENST00000582252 HSD3B2P26439 372 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms