RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CEACAM1P13688 526 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 HRH2P25021 359 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 IMPA1P29218 277 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 OAS2P29728 719 aaKnown RBP13.83□□□□□ -0.2
SKA2-205ENST00000580541 GMPRP36959 345 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 OR1D5P58170 312 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 NFKB2Q00653 900 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 NAE1Q13564 534 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 TSTA3Q13630 321 aaPredicted RBP13.83□□□□□ -0.2
SKA2-205ENST00000580541 GRB7Q14451 532 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 WDR74Q6RFH5 385 aaPredicted RBP13.83□□□□□ -0.2
SKA2-205ENST00000580541 ZYG11AQ6WRX3 759 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 CDHR3Q6ZTQ4 885 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 SPRED1Q7Z699 444 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 HOMEZQ8IX15 550 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 CARFQ8N187 725 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 ARMC2Q8NEN0 867 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 BAHD1Q8TBE0 780 aaPredicted RBP13.83□□□□□ -0.2
SKA2-205ENST00000580541 NCSTNQ92542 709 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 MED8Q96G25 268 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 FAM111AQ96PZ2 611 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 CD180Q99467 661 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 TBC1D10AQ9BXI6 508 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 CD244Q9BZW8 370 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 LRRN3Q9H3W5 708 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 XKR8Q9H6D3 395 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 INTS7Q9NVH2 962 aaKnown RBP13.83□□□□□ -0.2
SKA2-205ENST00000580541 COPG2Q9UBF2 871 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 EPHA6Q9UF33 1036 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 IKZF3Q9UKT9 509 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 PLAGL1Q9UM63 463 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 APOBEC2Q9Y235 224 aaKnown RBP13.83□□□□□ -0.2
SKA2-205ENST00000580541 ANGPTL3Q9Y5C1 460 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 KCNE2Q9Y6J6 123 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 U3KQA8 63 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 DMDP11532 3685 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 ASXL3Q9C0F0 2248 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 PRAMEF33A0A0G2JMD5 474 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 TMEM120BA0PK00 339 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 GSAPA4D1B5 854 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 TARM1B6A8C7 271 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 E7ENX8 843 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 TMX2-CTNND1H3BSU7 103 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 TK2O00142 265 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 BIRC5O15392 142 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 B4GAT1O43505 415 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 KATNA1O75449 491 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 CPNE6O95741 557 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 TOP3BO95985 862 aaKnown RBP13.82□□□□□ -0.2
SKA2-205ENST00000580541 MTHFD2P13995 350 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 CREB1P16220 341 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 TYRP1P17643 537 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 IMPDH1P20839 514 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 HPDP32754 393 aaPredicted RBP13.82□□□□□ -0.2
SKA2-205ENST00000580541 CAPZBP47756 277 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 DNAJB13P59910 316 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 ABATP80404 500 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 TAP2Q03519 686 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 SETDB1Q15047 1291 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 SF1Q15637 639 aaKnown RBP13.82□□□□□ -0.2
SKA2-205ENST00000580541 AMZ1Q400G9 498 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 CCSMST1Q4G0I0 132 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 TTMPQ5BVD1 217 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 CFAP157Q5JU67 520 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 ZNF761Q86XN6 746 aaPredicted RBP13.82□□□□□ -0.2
SKA2-205ENST00000580541 TMEM151AQ8N4L1 468 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 OR56A3Q8NH54 315 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 PPP4R1Q8TF05 950 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 PHF21BQ96EK2 531 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 GFM1Q96RP9 751 aaKnown RBP13.82□□□□□ -0.2
SKA2-205ENST00000580541 SELENOSQ9BQE4 189 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 ATG10Q9H0Y0 220 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 OPTCQ9UBM4 332 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 DYRK1BQ9Y463 629 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 RP1P56715 2156 aa13.82□□□□□ -0.2
SKA2-205ENST00000580541 K7EPI3 171 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 GIPC1O14908 333 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 TOX3O15405 576 aaPredicted RBP13.81□□□□□ -0.2
SKA2-205ENST00000580541 TRIM13O60858 407 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 H2AFYO75367 372 aaKnown RBP13.81□□□□□ -0.2
SKA2-205ENST00000580541 RFPL3O75679 317 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 RPLP0P05388 317 aaKnown RBP13.81□□□□□ -0.2
SKA2-205ENST00000580541 MYF5P13349 255 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 POLR2CP19387 275 aaPredicted RBP13.81□□□□□ -0.2
SKA2-205ENST00000580541 CD1CP29017 333 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 CMPK1P30085 196 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 HERVK_113P63132 956 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 PPP2R2AP63151 447 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 SPIDRQ14159 915 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 PCBP2Q15366 365 aaKnown RBP eCLIP13.81□□□□□ -0.23e-12■■■■■ 44.1
SKA2-205ENST00000580541 PTCHD3Q3KNS1 767 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 LIPMQ5VYY2 423 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 TMEM71Q6P5X7 295 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 LRRC70Q7Z2Q7 622 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 NUDCD3Q8IVD9 361 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 SPNS2Q8IVW8 549 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 TRIM42Q8IWZ5 723 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 KLHDC8AQ8IYD2 350 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 ADGRF3Q8IZF5 1079 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 PTGR2Q8N8N7 351 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms