RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 FOLR3P41439 243 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 SNX1Q13596 522 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 GRM7Q14831 915 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 MYBPC3Q14896 1274 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 BRD3Q15059 726 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 IGFBP7Q16270 282 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 CYP2A13Q16696 494 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 FAM214AQ32MH5 1076 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 DCAF10Q5QP82 559 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 NEK10Q6ZWH5 1172 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 OVCH1Q7RTY7 1134 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 TRIM73Q86UV7 250 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 MCATQ8IVS2 390 aaKnown RBP13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 LRRC8AQ8IWT6 810 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 TAB3Q8N5C8 712 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 CLEC1AQ8NC01 280 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 FBXO15Q8NCQ5 510 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 MCUQ8NE86 351 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 FDCSPQ8NFU4 85 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 COG1Q8WTW3 980 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 LPGAT1Q92604 370 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 VPS50Q96JG6 964 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 NRTNQ99748 197 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 SPRTNQ9H040 489 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 INTS10Q9NVR2 710 aaKnown RBP13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 MARCH4Q9P2E8 410 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 IFT80Q9P2H3 777 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 ANKMY1Q9P2S6 941 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 NDOR1Q9UHB4 597 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 GPN3Q9UHW5 284 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 SLC39A10Q9ULF5 831 aa13.93□□□□□ -0.18
SMARCE1-216ENST00000580419 FAM237BA0A1B0GVD1 139 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 PEX12O00623 359 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 PCDH17O14917 1159 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 DSCR3O14972 297 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 HCRTR1O43613 425 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 C1orf105O95561 183 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 ZSCAN5DPP0CG00 497 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 CBSLP0DN79 551 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 MAGP20916 626 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 CBSP35520 551 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 BASP1P80723 227 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 KCNJ11Q14654 390 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 JMJD6Q6NYC1 403 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 FIGLAQ6QHK4 219 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 GSTA5Q7RTV2 222 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 RASGEF1CQ8N431 466 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 EFCAB3Q8N7B9 438 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 LKAAEAR1Q8TD35 194 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 NAP1L3Q99457 506 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 XAB2Q9HCS7 855 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 CUEDC1Q9NWM3 386 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 PLAAQ9Y263 795 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 UNC79Q9P2D8 2635 aa13.92□□□□□ -0.18
SMARCE1-216ENST00000580419 TTLL8A6PVC2 850 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 AGPSO00116 658 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 EIF3FO00303 357 aaPredicted RBP13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 VPS4BO75351 444 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 MMP11P24347 488 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 NMBRP28336 390 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 SESN2P58004 480 aaPredicted RBP13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 ATP1A4Q13733 1029 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 SF1Q15637 639 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 CYP1B1Q16678 543 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 PRMT9Q6P2P2 845 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 CILP2Q8IUL8 1156 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 ZNF655Q8N720 491 aaPredicted RBP13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 PRELID2Q8N945 189 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 OR2A1Q8NGT9 310 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 CPT1CQ8TCG5 803 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 TM9SF4Q92544 642 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 RNF31Q96EP0 1072 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 MVB12AQ96EY5 273 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 NUDT9Q9BW91 350 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 KLHL25Q9H0H3 589 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 FAM114A2Q9NRY5 505 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 VPS4AQ9UN37 437 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 PTRH2Q9Y3E5 179 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 JRKLQ9Y4A0 524 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 COMMD10Q9Y6G5 202 aa13.91□□□□□ -0.18
SMARCE1-216ENST00000580419 NOTCH2Q04721 2471 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 OR2A25A4D2G3 310 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 ZNF839A8K0R7 811 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 IQCF5A8MTL0 148 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 MYO1CO00159 1063 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 PSIP1O75475 530 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 VAPBO95292 243 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 GP1BBP13224 206 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 ITGAXP20702 1163 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 GRIA3P42263 894 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 MAGEA3P43357 314 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 MLLT10P55197 1068 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 AIMP2Q13155 320 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 CTSL3PQ5NE16 218 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 MLIPQ5VWP3 458 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 FCRL6Q6DN72 434 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 NAPRTQ6XQN6 538 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 MICALCLQ6ZW33 695 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 RNF44Q7L0R7 432 aa13.9□□□□□ -0.18
SMARCE1-216ENST00000580419 PRUNE1Q86TP1 453 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms