RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 CDYLQ9Y232 598 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 B3GNT3Q9Y2A9 372 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 A0A0U1RQJ8 604 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 ZNF839A8K0R7 811 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 AGPSO00116 658 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 DSCR3O14972 297 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 VAPBO95292 243 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 FGGP02679 453 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 ERVK-10P10266 1014 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 ETS1P14921 441 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 ITGA3P26006 1051 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 EIF3BP55884 814 aaKnown RBP13.17□□□□□ -0.3
GGA3-208ENST00000579743 RAPSNQ13702 412 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 SLC9A5Q14940 896 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 FAM69BQ5VUD6 431 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 MRPL14Q6P1L8 145 aaKnown RBP13.17□□□□□ -0.3
GGA3-208ENST00000579743 MICALCLQ6ZW33 695 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 OVCH1Q7RTY7 1134 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 LDB1Q86U70 411 aaPredicted RBP13.17□□□□□ -0.3
GGA3-208ENST00000579743 TAX1BP1Q86VP1 789 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 VRK3Q8IV63 474 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 KRT222Q8N1A0 295 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 C2orf73Q8N5S3 287 aaPredicted RBP13.17□□□□□ -0.3
GGA3-208ENST00000579743 LINC01555Q8NAE3 123 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 COG1Q8WTW3 980 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 LZTFL1Q9NQ48 299 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 FAM114A2Q9NRY5 505 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 CUTCQ9NTM9 273 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 CUEDC1Q9NWM3 386 aaPredicted RBP13.17□□□□□ -0.3
GGA3-208ENST00000579743 SAMD15Q9P1V8 674 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 CDC23Q9UJX2 597 aa13.17□□□□□ -0.3
GGA3-208ENST00000579743 TNRC6AQ8NDV7 1962 aaKnown RBP13.16□□□□□ -0.3
GGA3-208ENST00000579743 BLACEA4D250 179 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 E5RI56 91 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 H3BMH7 237 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 CEP104O60308 925 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 ESR1P03372 595 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 ZSCAN5DPP0CG00 497 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 CHRM3P20309 590 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 MMP11P24347 488 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 CMPK1P30085 196 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 PEBP1P30086 187 aaKnown RBP13.16□□□□□ -0.3
GGA3-208ENST00000579743 HSD17B2P37059 387 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 OCA2Q04671 838 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 SEMA3AQ14563 771 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 CASC4Q6P4E1 433 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 LRRC8BQ6P9F7 803 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 IGFL3Q6UXB1 125 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 PRUNE1Q86TP1 453 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 GAS2L3Q86XJ1 694 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 LMNTD1Q8N9Z9 388 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 IL17FQ96PD4 163 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 CCDC68Q9H2F9 335 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 SEMA3GQ9NS98 782 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 TREX1Q9NSU2 369 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 SPATA7Q9P0W8 599 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 MARCH4Q9P2E8 410 aaPredicted RBP13.16□□□□□ -0.3
GGA3-208ENST00000579743 KLHL20Q9Y2M5 609 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 PTPN13Q12923 2485 aa13.16□□□□□ -0.3
GGA3-208ENST00000579743 RP1L1Q8IWN7 2480 aaPredicted RBP13.16□□□□□ -0.3
GGA3-208ENST00000579743 MAGEB16A2A368 324 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 PRPF4O43172 522 aaKnown RBP eCLIP13.15□□□□□ -0.3
GGA3-208ENST00000579743 HCRTR1O43613 425 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 PHF2O75151 1096 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 VPS26AO75436 327 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 C1orf105O95561 183 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 DDAH2O95865 285 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 TPSB2P20231 275 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 ATP5DP30049 168 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 GRIA3P42263 894 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 CARSP49589 748 aaKnown RBP13.15□□□□□ -0.3
GGA3-208ENST00000579743 SOX8P57073 446 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 VSX2P58304 361 aaPredicted RBP13.15□□□□□ -0.3
GGA3-208ENST00000579743 CRADDP78560 199 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 TPSAB1Q15661 275 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 RBBP7Q16576 425 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 TTLL9Q3SXZ7 439 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 ANKRD20A4Q4UJ75 823 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 AGAP7PQ5VUJ5 663 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 PRMT9Q6P2P2 845 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 CNSTQ6PJW8 725 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 ZNF662Q6ZS27 426 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 RBMXL3Q8N7X1 1067 aaKnown RBP13.15□□□□□ -0.3
GGA3-208ENST00000579743 HMGCLL1Q8TB92 370 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 SSC4DQ8WTU2 575 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 AGAP4Q96P64 663 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 PSMG3-AS1Q96PY0 264 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 KIFC1Q9BW19 673 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 P2RY12Q9H244 342 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 SLC26A1Q9H2B4 701 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 AGPAT4Q9NRZ5 378 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 LUZP4Q9P127 313 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 CIDEBQ9UHD4 219 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 CDC14AQ9UNH5 594 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 MED13Q9UHV7 2174 aa13.15□□□□□ -0.3
GGA3-208ENST00000579743 CCNDBP1O95273 360 aa13.14□□□□□ -0.31
GGA3-208ENST00000579743 ONECUT2O95948 504 aa13.14□□□□□ -0.31
GGA3-208ENST00000579743 CATP04040 527 aaKnown RBP13.14□□□□□ -0.31
GGA3-208ENST00000579743 OGNP20774 298 aaKnown RBP13.14□□□□□ -0.31
GGA3-208ENST00000579743 MGAT1P26572 445 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms