RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 INAVAQ3KP66 663 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 THOC6Q86W42 341 aaKnown RBP10.4□□□□□ -0.74
SS18-213ENST00000579640 AMIGO1Q86WK6 493 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 TEX9Q8N6V9 391 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 FAM181AQ8N9Y4 354 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 OR6C4Q8NGE1 309 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 ESAMQ96AP7 390 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 MED8Q96G25 268 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 C7orf26Q96N11 449 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 IL17FQ96PD4 163 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 HAUS8Q9BT25 410 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 SRMSQ9H3Y6 488 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 DNAAF2Q9NVR5 837 aaKnown RBP10.4□□□□□ -0.74
SS18-213ENST00000579640 GPRC5BQ9NZH0 403 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 CIDEBQ9UHD4 219 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.4□□□□□ -0.74
SS18-213ENST00000579640 HCN4Q9Y3Q4 1203 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 ASB1Q9Y576 335 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 PRAMEF33A0A0G2JMD5 474 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 LRRC14BA6NHZ5 514 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 GIPC1O14908 333 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 NUDT21O43809 227 aaKnown RBP10.4□□□□□ -0.75
SS18-213ENST00000579640 FOXD2O60548 495 aaPredicted RBP10.4□□□□□ -0.75
SS18-213ENST00000579640 GDF5P43026 501 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 PKNOX1P55347 436 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 MAZP56270 477 aaKnown RBP10.4□□□□□ -0.75
SS18-213ENST00000579640 OCRLQ01968 901 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 CDC16Q13042 620 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 PRKAA1Q13131 559 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 FBXO48Q5FWF7 155 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 ARL13AQ5H913 290 aaPredicted RBP10.4□□□□□ -0.75
SS18-213ENST00000579640 KLHL35Q6PF15 583 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 LCTLQ6UWM7 567 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 GOLGA7Q7Z5G4 137 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 GATAD2AQ86YP4 633 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 SFTPA2Q8IWL1 248 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 SNX31Q8N9S9 440 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 KYQ8NBH2 561 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 PPFIBP2Q8ND30 876 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 SLC22A18Q96BI1 424 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 PYCR2Q96C36 320 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 MAGEB10Q96LZ2 347 aaPredicted RBP10.4□□□□□ -0.75
SS18-213ENST00000579640 ZNF382Q96SR6 550 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 PITPNM3Q9BZ71 974 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 SMOC1Q9H4F8 434 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 NCDNQ9UBB6 729 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 SLC22A14Q9Y267 594 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 DYRK1BQ9Y463 629 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 KCNE2Q9Y6J6 123 aa10.4□□□□□ -0.75
SS18-213ENST00000579640 RALGAPA1Q6GYQ0 2036 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 LNP1A1A4G5 178 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 RHPN2P1A8MT19 583 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 SHOX2O60902 331 aaPredicted RBP10.39□□□□□ -0.75
SS18-213ENST00000579640 CCNDBP1O95273 360 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 OTCP00480 354 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 VIMP08670 466 aaKnown RBP10.39□□□□□ -0.75
SS18-213ENST00000579640 GLB1P16278 677 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 EPHA4P54764 986 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 CDH13P55290 713 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 PCDH1Q08174 1060 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 FASTKQ14296 549 aaKnown RBP10.39□□□□□ -0.75
SS18-213ENST00000579640 KIR2DS3Q14952 304 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 RBBP7Q16576 425 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 PRAMEF13Q5VWM6 474 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 CES4AQ5XG92 561 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 TCEAL6Q6IPX3 200 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 CRLF3Q8IUI8 442 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 SLC35F3Q8IY50 421 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 LINC01555Q8NAE3 123 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 OR4E2Q8NGC2 313 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 TRPC4APQ8TEL6 797 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 TCEAL3Q969E4 200 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 ATP6V1E2Q96A05 226 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 CHMP6Q96FZ7 201 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 NSUN5Q96P11 429 aaKnown RBP10.39□□□□□ -0.75
SS18-213ENST00000579640 ZNF317Q96PQ6 595 aaPredicted RBP10.39□□□□□ -0.75
SS18-213ENST00000579640 SLC38A3Q99624 504 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 NTMT1Q9BV86 223 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 TWSG1Q9GZX9 223 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 ILKAPQ9H0C8 392 aaPredicted RBP10.39□□□□□ -0.75
SS18-213ENST00000579640 EPB41L1Q9H4G0 881 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 XKR8Q9H6D3 395 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 NOL11Q9H8H0 719 aaKnown RBP10.39□□□□□ -0.75
SS18-213ENST00000579640 IPPKQ9H8X2 491 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 ZBTB26Q9HCK0 441 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 SEMA4BQ9NPR2 832 aaPredicted RBP10.39□□□□□ -0.75
SS18-213ENST00000579640 INTS7Q9NVH2 962 aaKnown RBP10.39□□□□□ -0.75
SS18-213ENST00000579640 EVA1BQ9NVM1 165 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 HAO1Q9UJM8 370 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 RAP2CQ9Y3L5 183 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 PCDHB11Q9Y5F2 797 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 ENTPD2Q9Y5L3 495 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 MUC6Q6W4X9 2439 aa10.39□□□□□ -0.75
SS18-213ENST00000579640 CABIN1Q9Y6J0 2220 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 GMNCA6NCL1 334 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 MATN2O00339 956 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 TRIM38O00635 465 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 CLGNO14967 610 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 PPM1DO15297 605 aa10.38□□□□□ -0.75
SS18-213ENST00000579640 ZW10O43264 779 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms