RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 TAX1BP1Q86VP1 789 aa16.75■□□□□ 0.27
SMG6-214ENST00000573827 RAD51AP1Q96B01 352 aa16.75■□□□□ 0.27
SMG6-214ENST00000573827 SNX7Q9UNH6 387 aa16.75■□□□□ 0.27
SMG6-214ENST00000573827 CRYL1Q9Y2S2 319 aa16.75■□□□□ 0.27
SMG6-214ENST00000573827 SPTBN1Q01082 2364 aaKnown RBP16.74■□□□□ 0.27
SMG6-214ENST00000573827 MAGEB16A2A368 324 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 ARHGEF33A8MVX0 844 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 H3BMM5 538 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 MKRN2OSH3BPM6 223 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 NRP2O60462 931 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 CTSVO60911 334 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 PKMP14618 531 aaKnown RBP16.74■□□□□ 0.27
SMG6-214ENST00000573827 FOXL2P58012 376 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 YBX1P67809 324 aaKnown RBP16.74■□□□□ 0.27
SMG6-214ENST00000573827 SARNPP82979 210 aaKnown RBP16.74■□□□□ 0.27
SMG6-214ENST00000573827 DHX34Q14147 1143 aaKnown RBP16.74■□□□□ 0.27
SMG6-214ENST00000573827 CYP2A13Q16696 494 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 RNASEH2BQ5TBB1 312 aaKnown RBP16.74■□□□□ 0.27
SMG6-214ENST00000573827 MRPL14Q6P1L8 145 aaKnown RBP16.74■□□□□ 0.27
SMG6-214ENST00000573827 TLDC1Q6P9B6 456 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 HOOK3Q86VS8 718 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 MCATQ8IVS2 390 aaKnown RBP16.74■□□□□ 0.27
SMG6-214ENST00000573827 DENND6AQ8IWF6 608 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 GPR135Q8IZ08 494 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 ZNF655Q8N720 491 aaPredicted RBP16.74■□□□□ 0.27
SMG6-214ENST00000573827 OR2A1Q8NGT9 310 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 PROKR1Q8TCW9 393 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 ZNF669Q96BR6 464 aaPredicted RBP16.74■□□□□ 0.27
SMG6-214ENST00000573827 FAM136AQ96C01 138 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 NAP1L3Q99457 506 aaPredicted RBP16.74■□□□□ 0.27
SMG6-214ENST00000573827 CLMPQ9H6B4 373 aa16.74■□□□□ 0.27
SMG6-214ENST00000573827 INTS10Q9NVR2 710 aaKnown RBP16.74■□□□□ 0.27
SMG6-214ENST00000573827 DHCR7Q9UBM7 475 aaKnown RBP16.74■□□□□ 0.27
SMG6-214ENST00000573827 TNRC6AQ8NDV7 1962 aaKnown RBP16.74■□□□□ 0.27
SMG6-214ENST00000573827 HEATR5BQ9P2D3 2071 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 ARGFXA6NJG6 315 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 USP27XA6NNY8 438 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 KIF5CO60282 957 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 PSIP1O75475 530 aaKnown RBP16.73■□□□□ 0.27
SMG6-214ENST00000573827 FKBP9O95302 570 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 IVDP26440 423 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 PSMB5P28074 263 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 CCNFP41002 786 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 GRIA3P42263 894 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 KCNC4Q03721 635 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 FASTKQ14296 549 aaKnown RBP16.73■□□□□ 0.27
SMG6-214ENST00000573827 COLEC12Q5KU26 742 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 C1orf189Q5VU69 101 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 ZNF470Q6ECI4 717 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 CASC4Q6P4E1 433 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 CNSTQ6PJW8 725 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 FIGLAQ6QHK4 219 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 OTUD6BQ8N6M0 293 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 SLCO2A1Q92959 643 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 SLC22A18Q96BI1 424 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 DHRS4Q9BTZ2 278 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 RAB11FIP5Q9BXF6 653 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 ING2Q9H160 280 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 SYNPO2LQ9H987 977 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 PLAC1Q9HBJ0 212 aa16.73■□□□□ 0.27
SMG6-214ENST00000573827 PCDHGA9Q9Y5G4 932 aaKnown RBP16.73■□□□□ 0.27
SMG6-214ENST00000573827 NBPF19A0A087WUL8 3843 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 FITM1A5D6W6 292 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 MYO1CO00159 1063 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 USP1O94782 785 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 MED26O95402 600 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 PAMP19021 973 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 SLC1A2P43004 574 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 FOXK1P85037 733 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 TIAL1Q01085 375 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMG6-214ENST00000573827 KLRB1Q12918 225 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 CTBP1Q13363 440 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 ASB18Q6ZVZ8 466 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 OR2L3Q8NG85 312 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 PDLIM2Q96JY6 352 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 TRMT1Q9NXH9 659 aaKnown RBP16.72■□□□□ 0.27
SMG6-214ENST00000573827 SPATA7Q9P0W8 599 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 KLHL42Q9P2K6 505 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 SLC39A10Q9ULF5 831 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 SRPK3Q9UPE1 567 aa16.72■□□□□ 0.27
SMG6-214ENST00000573827 TARM1B6A8C7 271 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 FANCGO15287 622 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 ZSCAN12O43309 604 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 UMODP07911 640 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 AGXTP21549 392 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 MCM3P25205 808 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 DCDP81605 110 aaKnown RBP16.71■□□□□ 0.27
SMG6-214ENST00000573827 ATP1A4Q13733 1029 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 SF1Q15637 639 aaKnown RBP16.71■□□□□ 0.27
SMG6-214ENST00000573827 KLHL38Q2WGJ6 581 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 NKAIN1Q4KMZ8 207 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 MSS51Q4VC12 460 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 CYHR1Q6ZMK1 362 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 COX15Q7KZN9 410 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 MRGPREQ86SM8 312 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 PPIL6Q8IXY8 311 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 ZUFSPQ96AP4 578 aa16.71■□□□□ 0.27
SMG6-214ENST00000573827 DDX47Q9H0S4 455 aaKnown RBP16.71■□□□□ 0.27
SMG6-214ENST00000573827 FBXO6Q9NRD1 293 aaPredicted RBP16.71■□□□□ 0.27
SMG6-214ENST00000573827 SAMD15Q9P1V8 674 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms