RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 P4HTMQ9NXG6 502 aa17.38■□□□□ 0.37
CHD3-214ENST00000572579 IL1RAPL1Q9NZN1 696 aa17.38■□□□□ 0.37
CHD3-214ENST00000572579 BFARQ9NZS9 450 aa17.38■□□□□ 0.37
CHD3-214ENST00000572579 ANAPC5Q9UJX4 755 aa17.38■□□□□ 0.37
CHD3-214ENST00000572579 SOX13Q9UN79 622 aa17.38■□□□□ 0.37
CHD3-214ENST00000572579 ZKSCAN5Q9Y2L8 839 aa17.38■□□□□ 0.37
CHD3-214ENST00000572579 ZNF451Q9Y4E5 1061 aa17.38■□□□□ 0.37
CHD3-214ENST00000572579 NIPSNAP2O75323 286 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 NDUFS3O75489 264 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 S1PR4O95977 384 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 RNF224P0DH78 156 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 TPSB2P20231 275 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 PPARGP37231 505 aaPredicted RBP17.37■□□□□ 0.37
CHD3-214ENST00000572579 MAGEA6P43360 314 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 EIF3BP55884 814 aaKnown RBP17.37■□□□□ 0.37
CHD3-214ENST00000572579 SF1Q15637 639 aaKnown RBP17.37■□□□□ 0.37
CHD3-214ENST00000572579 TPSAB1Q15661 275 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 TYSND1Q2T9J0 566 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 PLEKHN1Q494U1 663 aaPredicted RBP17.37■□□□□ 0.37
CHD3-214ENST00000572579 DCAF10Q5QP82 559 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 TTLL10Q6ZVT0 673 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 CENPUQ71F23 418 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 C19orf60Q96EN9 201 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 MS4A14Q96JA4 679 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 SLC30A3Q99726 388 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 ZNF552Q9H707 407 aaPredicted RBP17.37■□□□□ 0.37
CHD3-214ENST00000572579 MRM3Q9HC36 420 aaKnown RBP17.37■□□□□ 0.37
CHD3-214ENST00000572579 STOX2Q9P2F5 926 aaPredicted RBP17.37■□□□□ 0.37
CHD3-214ENST00000572579 GNPTGQ9UJJ9 305 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 MED16Q9Y2X0 877 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 NEU2Q9Y3R4 380 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 PCDHGB7Q9Y5F8 929 aa17.37■□□□□ 0.37
CHD3-214ENST00000572579 LOC105369274A0A096LPK9 316 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 LOC102723532A0A0G2JNH3 316 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 MATN4O95460 622 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 CCDC175P0C221 793 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 ALAS2P22557 587 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 VPS41P49754 854 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 INPP5JQ15735 1006 aaPredicted RBP17.36■□□□□ 0.37
CHD3-214ENST00000572579 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.36■□□□□ 0.37
CHD3-214ENST00000572579 FRMPD2BQ6IN97 320 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 FBXO42Q6P3S6 717 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 C4orf22Q6V702 233 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 GSTA5Q7RTV2 222 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 LRRC6Q86X45 466 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 RAB43Q86YS6 212 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 OR4N4Q8N0Y3 316 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 GALNT11Q8NCW6 608 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 OR2A1Q8NGT9 310 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 HMGCLL1Q8TB92 370 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 PTERQ96BW5 349 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 MIPEPQ99797 713 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 NDC1Q9BTX1 674 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 TSSK1BQ9BXA7 367 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 GPR83Q9NYM4 423 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 TSR3Q9UJK0 312 aaKnown RBP17.36■□□□□ 0.37
CHD3-214ENST00000572579 SRPK3Q9UPE1 567 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 PADI2Q9Y2J8 665 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 CRYL1Q9Y2S2 319 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 KLK4Q9Y5K2 254 aa17.36■□□□□ 0.37
CHD3-214ENST00000572579 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.35■□□□□ 0.37
CHD3-214ENST00000572579 FITM1A5D6W6 292 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 F8W8V4 182 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 ALOX12BO75342 701 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 FOLR3P41439 243 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 RRADP55042 308 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 CYP2A13Q16696 494 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 ACSBG2Q5FVE4 666 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 CNSTQ6PJW8 725 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 OTOAQ7RTW8 1153 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 OVCH1Q7RTY7 1134 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 ATCAYQ86WG3 371 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 OR2L3Q8NG85 312 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 RAD51AP1Q96B01 352 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 SLC22A18Q96BI1 424 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 PANX3Q96QZ0 392 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 SPSB2Q99619 263 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 CUTCQ9NTM9 273 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 TXLNGQ9NUQ3 528 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 IRAK4Q9NWZ3 460 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.35■□□□□ 0.37
CHD3-214ENST00000572579 GPN3Q9UHW5 284 aaPredicted RBP17.35■□□□□ 0.37
CHD3-214ENST00000572579 SLC39A10Q9ULF5 831 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 CCDC88CQ9P219 2028 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 SHANK1Q9Y566 2161 aa17.35■□□□□ 0.37
CHD3-214ENST00000572579 SPTAN1Q13813 2472 aaKnown RBP17.35■□□□□ 0.37
CHD3-214ENST00000572579 A0A1B0GX78 115 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 TCP11X1B4DZS4 312 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 SOCS6O14544 535 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 DPM1O60762 260 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 SEMA7AO75326 666 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 RPN2P04844 631 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 OR1D4P47884 311 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 SOX8P57073 446 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 CDK16Q00536 496 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 GPS1Q13098 491 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 TMED2Q15363 201 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 NKG7Q16617 165 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 CRB2Q5IJ48 1285 aa17.34■□□□□ 0.37
CHD3-214ENST00000572579 ZNF549Q6P9A3 640 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms