RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 ZC3H12BQ5HYM0 836 aaKnown RBP12.62□□□□□ -0.39
SPG7-221ENST00000569720 MRPL14Q6P1L8 145 aaKnown RBP12.62□□□□□ -0.39
SPG7-221ENST00000569720 DRICH1Q6PGQ1 229 aaPredicted RBP12.62□□□□□ -0.39
SPG7-221ENST00000569720 UNC5DQ6UXZ4 953 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 SLC13A5Q86YT5 568 aaPredicted RBP12.62□□□□□ -0.39
SPG7-221ENST00000569720 DCUN1D3Q8IWE4 304 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 ZADH2Q8N4Q0 377 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 CCDC89Q8N998 374 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 MNS1Q8NEH6 495 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 PPHLN1Q8NEY8 458 aaKnown RBP12.62□□□□□ -0.39
SPG7-221ENST00000569720 CFAP61Q8NHU2 1237 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 PRR7Q8TB68 274 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 NACC2Q96BF6 587 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 ATP13A2Q9NQ11 1180 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 CASS4Q9NQ75 786 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 RAB6BQ9NRW1 208 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 CATSPERZQ9NTU4 200 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 SLC2A6Q9UGQ3 507 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 B3GNT3Q9Y2A9 372 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 TCAF1Q9Y4C2 921 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 MRFAP1Q9Y605 127 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 HIVEP3Q5T1R4 2406 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 CCDC188H7C350 402 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 PRMT5O14744 637 aaPredicted RBP12.61□□□□□ -0.39
SPG7-221ENST00000569720 CEP104O60308 925 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 SEMA7AO75326 666 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 GPC4O75487 556 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 FKBP9O95302 570 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 APRTP07741 180 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 CTSBP07858 339 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 TTPAP49638 278 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 SOX8P57073 446 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 MRPL49Q13405 166 aaKnown RBP12.61□□□□□ -0.39
SPG7-221ENST00000569720 ELOAQ14241 798 aaKnown RBP12.61□□□□□ -0.39
SPG7-221ENST00000569720 SF1Q15637 639 aaKnown RBP12.61□□□□□ -0.39
SPG7-221ENST00000569720 OASLQ15646 514 aaKnown RBP12.61□□□□□ -0.39
SPG7-221ENST00000569720 PLEKHN1Q494U1 663 aaPredicted RBP12.61□□□□□ -0.39
SPG7-221ENST00000569720 TCTE1Q5JU00 501 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 IRAK1BP1Q5VVH5 260 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 YOD1Q5VVQ6 348 aaPredicted RBP12.61□□□□□ -0.39
SPG7-221ENST00000569720 PTRHD1Q6GMV3 140 aaKnown RBP12.61□□□□□ -0.39
SPG7-221ENST00000569720 IGFL3Q6UXB1 125 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 TTLL10Q6ZVT0 673 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 ZNF534Q76KX8 674 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 MCATQ8IVS2 390 aaKnown RBP12.61□□□□□ -0.39
SPG7-221ENST00000569720 RAB42Q8N4Z0 105 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 TTC29Q8NA56 475 aaPredicted RBP12.61□□□□□ -0.39
SPG7-221ENST00000569720 OR2L8Q8NGY9 312 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 FKBP10Q96AY3 582 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 VPS50Q96JG6 964 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 PANX3Q96QZ0 392 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 RAB11FIP5Q9BXF6 653 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 ILKAPQ9H0C8 392 aaPredicted RBP12.61□□□□□ -0.39
SPG7-221ENST00000569720 ZNF552Q9H707 407 aaPredicted RBP12.61□□□□□ -0.39
SPG7-221ENST00000569720 PAK5Q9P286 719 aa12.61□□□□□ -0.39
SPG7-221ENST00000569720 DOCK10Q96BY6 2186 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 A0A1B0GX78 115 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 AGPSO00116 658 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 RASGRF2O14827 1237 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 KPNA5O15131 536 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 CD3EAPO15446 510 aaKnown RBP12.6□□□□□ -0.39
SPG7-221ENST00000569720 CNOT3O75175 753 aaKnown RBP12.6□□□□□ -0.39
SPG7-221ENST00000569720 ALBP02768 609 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 UMODP07911 640 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 ITGA3P26006 1051 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 AOAHP28039 575 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 GRIA1P42261 906 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 AIMP2Q13155 320 aaKnown RBP12.6□□□□□ -0.39
SPG7-221ENST00000569720 GRM7Q14831 915 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 CCNG2Q16589 344 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 PCID2Q5JVF3 399 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 FIGLAQ6QHK4 219 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 ZNF572Q7Z3I7 529 aaPredicted RBP12.6□□□□□ -0.39
SPG7-221ENST00000569720 PPP1R32Q7Z5V6 425 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 TAX1BP1Q86VP1 789 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 CREG2Q8IUH2 290 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 VRK3Q8IV63 474 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 FAM20CQ8IXL6 584 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 C2orf73Q8N5S3 287 aaPredicted RBP12.6□□□□□ -0.39
SPG7-221ENST00000569720 CEP112Q8N8E3 955 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 LINC01555Q8NAE3 123 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 SKA2Q8WVK7 121 aaPredicted RBP12.6□□□□□ -0.39
SPG7-221ENST00000569720 C1orf54Q8WWF1 131 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 SNRNP40Q96DI7 357 aaKnown RBP12.6□□□□□ -0.39
SPG7-221ENST00000569720 ZNF778Q96MU6 729 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 WDR54Q9H977 334 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 GNPTGQ9UJJ9 305 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 DRG1Q9Y295 367 aaKnown RBP12.6□□□□□ -0.39
SPG7-221ENST00000569720 KLHL20Q9Y2M5 609 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 UNC79Q9P2D8 2635 aa12.6□□□□□ -0.39
SPG7-221ENST00000569720 MDC1Q14676 2089 aaKnown RBP12.59□□□□□ -0.39
SPG7-221ENST00000569720 IQCF5A8MTL0 148 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 AP3B1O00203 1094 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 DSCR3O14972 297 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 NDUFS3O75489 264 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 URI1O94763 535 aaPredicted RBP12.59□□□□□ -0.39
SPG7-221ENST00000569720 SLCO2B1O94956 709 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 FGGP02679 453 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 MMP11P24347 488 aa12.59□□□□□ -0.39
SPG7-221ENST00000569720 SNX1Q13596 522 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms