RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 DNAJB13P59910 316 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 HERVK_113P63132 956 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 TAP2Q03519 686 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 MPP2Q14168 576 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 GRB7Q14451 532 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 KIR2DS3Q14952 304 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 SETDB1Q15047 1291 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 PCBP2Q15366 365 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDH1-208ENST00000565810 SF1Q15637 639 aaKnown RBP7.54□□□□□ -1.2
CDH1-208ENST00000565810 PTCHD3Q3KNS1 767 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 AMZ1Q400G9 498 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 GUSBP11Q6P575 273 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 LRRC70Q7Z2Q7 622 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 ZNF438Q7Z4V0 828 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 ZNF761Q86XN6 746 aaPredicted RBP7.54□□□□□ -1.2
CDH1-208ENST00000565810 C2orf73Q8N5S3 287 aaPredicted RBP7.54□□□□□ -1.2
CDH1-208ENST00000565810 CCNYL1Q8N7R7 359 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 Q8N9G6 341 aaPredicted RBP7.54□□□□□ -1.2
CDH1-208ENST00000565810 PPFIBP2Q8ND30 876 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 OR56A3Q8NH54 315 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 MDM1Q8TC05 714 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 IFI44Q8TCB0 444 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 NETO1Q8TDF5 533 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 JPH3Q8WXH2 748 aaPredicted RBP7.54□□□□□ -1.2
CDH1-208ENST00000565810 ATP6V1E2Q96A05 226 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 CCDC74AQ96AQ1 378 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 PHOX2BQ99453 314 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 HAUS8Q9BT25 410 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 ERVK-6Q9BXR3 956 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 CD244Q9BZW8 370 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 ABCG4Q9H172 646 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 MLXIPLQ9NP71 852 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 ABCF3Q9NUQ8 709 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 DNAJC11Q9NVH1 559 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 OXSMQ9NWU1 459 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 OPTCQ9UBM4 332 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 SLC22A14Q9Y267 594 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 DYRK1BQ9Y463 629 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 PCDHB11Q9Y5F2 797 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 ENTPD2Q9Y5L3 495 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 KCNE2Q9Y6J6 123 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 LAMA1P25391 3075 aa7.54□□□□□ -1.2
CDH1-208ENST00000565810 KNL1Q8NG31 2342 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 PLXNB3Q9ULL4 1909 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 KRT87PA6NCN2 255 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 BTN3A3O00478 584 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 CLGNO14967 610 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 TAPBPO15533 448 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 MAP3K7O43318 606 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 TNFSF14O43557 240 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 GDF9O60383 454 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 FKBP9O95302 570 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 SIX3O95343 332 aaPredicted RBP7.53□□□□□ -1.2
CDH1-208ENST00000565810 MLYCDO95822 493 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 GP1BAP07359 652 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 CHRM5P08912 532 aaPredicted RBP7.53□□□□□ -1.2
CDH1-208ENST00000565810 DHRS4L1P0CG22 281 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 EPB42P16452 691 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 TYRP1P17643 537 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 ACP1P24666 158 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 GRK2P25098 689 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 EEF1DP29692 281 aaKnown RBP7.53□□□□□ -1.2
CDH1-208ENST00000565810 CMPK1P30085 196 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 ARL1P40616 181 aaPredicted RBP7.53□□□□□ -1.2
CDH1-208ENST00000565810 GDF5P43026 501 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 CAPZBP47756 277 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 SLC6A12P48065 614 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 AGTR2P50052 363 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 ATP1A2P50993 1020 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 NAGLUP54802 743 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 WDR4P57081 412 aaKnown RBP7.53□□□□□ -1.2
CDH1-208ENST00000565810 TBPL1P62380 186 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 ABATP80404 500 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 E2F1Q01094 437 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 CDC16Q13042 620 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 ILKQ13418 452 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 FASTKQ14296 549 aaKnown RBP7.53□□□□□ -1.2
CDH1-208ENST00000565810 NR1D2Q14995 579 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 NAA25Q14CX7 972 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 PCLAFQ15004 111 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 CLPPQ16740 277 aaPredicted RBP7.53□□□□□ -1.2
CDH1-208ENST00000565810 ZNF678Q5SXM1 525 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 PRAMEF13Q5VWM6 474 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 ATG16L1Q676U5 607 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 IRGCQ6NXR0 463 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 SUSD1Q6UWL2 747 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 LCTLQ6UWM7 567 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 THOC6Q86W42 341 aaKnown RBP7.53□□□□□ -1.2
CDH1-208ENST00000565810 PLXDC1Q8IUK5 500 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 KLHDC8AQ8IYD2 350 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 TEX9Q8N6V9 391 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 SNX31Q8N9S9 440 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 WDR48Q8TAF3 677 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 LRRC8CQ8TDW0 803 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 UBTD2Q8WUN7 234 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 NCSTNQ92542 709 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 ESAMQ96AP7 390 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 PYCR2Q96C36 320 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 ZDHHC12Q96GR4 267 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 DPYSL5Q9BPU6 564 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms