RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 UPP1Q16831 310 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 LINGO4Q6UY18 593 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 FAM217AQ8IXS0 508 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SETD9Q8NE22 299 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TRIB2Q92519 343 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ULK4Q96C45 1275 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ARPC5LQ9BPX5 153 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TINF2Q9BSI4 451 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TTPALQ9BTX7 342 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 GPSM3Q9Y4H4 160 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SCELO95171 688 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 HOXA9P31269 272 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 RUNDC3AQ59EK9 446 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 OR2T5Q6IEZ7 315 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 OR2T29Q8NH02 315 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TXNDC15Q96J42 360 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SERPINB11Q96P15 392 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 GPR83Q9NYM4 423 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 NINQ8N4C6 2090 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 DSCR3O14972 297 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ULK1O75385 1050 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 WBP4O75554 376 aaKnown RBP19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CTPS1P17812 591 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 HLA-DPA1P20036 260 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ATAD1Q8NBU5 361 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 APOL4Q9BPW4 351 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 BOCQ9BWV1 1114 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CPNE5Q9HCH3 593 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ELOVL2Q9NXB9 296 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 RNF181Q9P0P0 153 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 LOC730098B7Z3J9 87 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 M0R082 166 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PRAMEF12O95522 483 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CPSF4O95639 269 aaKnown RBP19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 NPPAP01160 153 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 STSP08842 583 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 OGNP20774 298 aaKnown RBP19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 GPR142Q7Z601 462 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 GPR149Q86SP6 731 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CACTIN-AS1Q8N1I8 211 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 UTP15Q8TED0 518 aaKnown RBP19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 NUAK2Q9H093 628 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PARVBQ9HBI1 364 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 EHD3Q9NZN3 535 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 XIRP2A4UGR9 3374 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PABPN1LA6NDY0 278 aaKnown RBP19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 NOTOA8MTQ0 251 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 FFAR2O15552 330 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 HOXD11P31277 338 aaPredicted RBP19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SLC19A1P41440 591 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SERINC3Q13530 473 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SNAP47Q5SQN1 464 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 FAM171BQ6P995 826 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 OR6K2Q8NGY2 324 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ACBD6Q9BR61 282 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CDADC1Q9BWV3 514 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 EBPLQ9BY08 206 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 WWOXQ9NZC7 414 aa19.99■□□□□ 0.79
MAP1LC3B-206ENST00000564844 OR2A25A4D2G3 310 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 STX7O15400 261 aaKnown RBP19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CHRM5P08912 532 aaPredicted RBP19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ACVR2AP27037 513 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 KCNQ1P51787 676 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ARHGEF7Q14155 803 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TYSND1Q2T9J0 566 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 BCL7AQ4VC05 210 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 OR4F3Q6IEY1 312 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 GALNT13Q8IUC8 556 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 GPR150Q8NGU9 434 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 NECTIN4Q96NY8 510 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ITPAQ9BY32 194 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 LRTM1Q9HBL6 345 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 EXOSC4Q9NPD3 245 aaKnown RBP19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 RAD18Q9NS91 495 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SLC6A14Q9UN76 642 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 METTL15A6NJ78 407 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 C2orf81A6NN90 581 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 NTRK1P04629 796 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 BCKDHAP12694 445 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PBX3P40426 434 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TGM4P49221 684 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 OR2B6P58173 313 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TWF1Q12792 350 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PLEKHG6Q3KR16 790 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ZNF621Q6ZSS3 439 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 GALNT7Q86SF2 657 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 LILRB4Q8NHJ6 448 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CIPCQ9C0C6 399 aa19.98■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CCL15-CCL14A0A0B4J2E2 113 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CBX4O00257 560 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 KMOO15229 486 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SLC10A3P09131 477 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CA5AP35218 305 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 GNPDA1P46926 289 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CRYBB1P53674 252 aaPredicted RBP19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CCL15Q16663 113 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CACHD1Q5VU97 1274 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 LRRC49Q8IUZ0 686 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SLC38A4Q969I6 547 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PRDM5Q9NQX1 630 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms