RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 GDE1Q9NZC3 331 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 C1RLQ9NZP8 487 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.6□□□□□ -1.83
HERC1-215ENST00000561436 WBP11Q9Y2W2 641 aaKnown RBP3.6□□□□□ -1.83
HERC1-215ENST00000561436 GRIP1Q9Y3R0 1128 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 LRP12Q9Y561 859 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 MTCH2Q9Y6C9 303 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 LAMB1P07942 1786 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 LILRA5A6NI73 299 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 TMEM189-UBE2V1I3L0A0 370 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 J3QR06 171 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 PLPP2O43688 288 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 SSX4O60224 188 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 KDM4BO94953 1096 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 ZWINTO95229 277 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 SNAI1O95863 264 aaPredicted RBP3.59□□□□□ -1.83
HERC1-215ENST00000561436 ACAA1P09110 424 aaPredicted RBP3.59□□□□□ -1.83
HERC1-215ENST00000561436 CCDC175P0C221 793 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 T-ENOLP0DO92 83 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 PFKFB1P16118 471 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 ERCC2P18074 760 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 S1PR1P21453 382 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 TNFRSF8P28908 595 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 CCKBRP32239 447 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 RAB28P51157 221 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 RAD23AP54725 363 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 MLLT10P55197 1068 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 TUBA1BP68363 451 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 SPOCK1Q08629 439 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 ZNF155Q12901 538 aaPredicted RBP3.59□□□□□ -1.83
HERC1-215ENST00000561436 HSPB3Q12988 150 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 PLA2G7Q13093 441 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 UBE2V1Q13404 147 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 ITGA7Q13683 1181 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 IL11RAQ14626 422 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 ARMC4Q5T2S8 1044 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 IRAK1BP1Q5VVH5 260 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 KRT39Q6A163 491 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 TMEM211Q6ICI0 200 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 ZSCAN25Q6NSZ9 544 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 CAMKMTQ7Z624 323 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 KRT77Q7Z794 578 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 IQCHQ86VS3 1027 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 TC2NQ8N9U0 490 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 TDRD5Q8NAT2 981 aaKnown RBP3.59□□□□□ -1.83
HERC1-215ENST00000561436 PPFIBP2Q8ND30 876 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 PAPD5Q8NDF8 572 aaKnown RBP3.59□□□□□ -1.83
HERC1-215ENST00000561436 ACVR1CQ8NER5 493 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 OR6J1Q8NGC5 347 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 OR10S1Q8NGN2 331 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 HMGCLL1Q8TB92 370 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 ACER1Q8TDN7 264 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 TMEM255BQ8WV15 326 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 NEUROG1Q92886 237 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 MTERF3Q96E29 417 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 THOC3Q96J01 351 aaKnown RBP3.59□□□□□ -1.83
HERC1-215ENST00000561436 ADGRG7Q96K78 797 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 MS4A10Q96PG2 267 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 SEPHS2Q99611 448 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 NEURL2Q9BR09 285 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 RIOK1Q9BRS2 568 aaKnown RBP3.59□□□□□ -1.83
HERC1-215ENST00000561436 ZPBPQ9BS86 351 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 LRMDAQ9H2I8 198 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 FKRPQ9H9S5 495 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 UBTD1Q9HAC8 227 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 OCIAD1Q9NX40 245 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 NYAP2Q9P242 653 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 OSGIN1Q9UJX0 560 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 ANAPC5Q9UJX4 755 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 POU2F3Q9UKI9 436 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 PA2G4Q9UQ80 394 aaKnown RBP3.59□□□□□ -1.83
HERC1-215ENST00000561436 CCL27Q9Y4X3 112 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 AKAP11Q9UKA4 1901 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 RAD50Q92878 1312 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 SYNRGQ9UMZ2 1314 aa3.59□□□□□ -1.83
HERC1-215ENST00000561436 EDDM13A0A1B0GTR0 161 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 A0A1W2PRQ8 180 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 A8MXE2 369 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 IDH1O75874 414 aaKnown RBP3.58□□□□□ -1.84
HERC1-215ENST00000561436 NGFRP08138 427 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 QDPRP09417 244 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 LINC00271P0C7V0 271 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 ZNF23P17027 643 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 CPT2P23786 658 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 EEF1B2P24534 225 aaKnown RBP3.58□□□□□ -1.84
HERC1-215ENST00000561436 NMBRP28336 390 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 PCGF2P35227 344 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 CD81P60033 236 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 COG7P83436 770 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 BNC1Q01954 994 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 LTBQ06643 244 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 RALGDSQ12967 914 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 SNTA1Q13424 505 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 ZNF234Q14588 700 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 MELKQ14680 651 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 SBK1Q52WX2 424 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 C12orf60Q5U649 245 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 KIAA1161Q6NSJ0 714 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 ZNF534Q76KX8 674 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 SLFN11Q7Z7L1 901 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms