RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 PRORYQ9H606 182 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 SYNPO2LQ9H987 977 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 CAB39LQ9H9S4 337 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 FAM114A2Q9NRY5 505 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 WDR70Q9NW82 654 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 SOHLH2Q9NX45 425 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 NINJ2Q9NZG7 142 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 SLC39A10Q9ULF5 831 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 PDE10AQ9Y233 779 aa13.4□□□□□ -0.26
TPM1-230ENST00000561266 A0A0J9YY10 115 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 STMND1H3BQB6 276 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 SLC16A8O95907 504 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 NTRK1P04629 796 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 RHOXF2BP0C7M4 288 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 CBSLP0DN79 551 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 ENO3P13929 434 aaPredicted RBP13.39□□□□□ -0.27
TPM1-230ENST00000561266 MAGP20916 626 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 F8A1P23610 371 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 CBSP35520 551 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 CCNFP41002 786 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 GRIA3P42263 894 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 TUBB4BP68371 445 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 IL11RAQ14626 422 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.39□□□□□ -0.27
TPM1-230ENST00000561266 LCN10Q6JVE6 187 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 UBE2R2Q712K3 238 aaPredicted RBP13.39□□□□□ -0.27
TPM1-230ENST00000561266 PPP1R3BQ86XI6 285 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 CARFQ8N187 725 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 DNAJC22Q8N4W6 341 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 CEP112Q8N8E3 955 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 FBXO15Q8NCQ5 510 aaPredicted RBP13.39□□□□□ -0.27
TPM1-230ENST00000561266 HMGCLL1Q8TB92 370 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 ZNF480Q8WV37 535 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 FCRL4Q96PJ5 515 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 TEFMQ96QE5 360 aaKnown RBP13.39□□□□□ -0.27
TPM1-230ENST00000561266 RUFY1Q96T51 708 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 MIPEPQ99797 713 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 RHOXF2Q9BQY4 288 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 SPRTNQ9H040 489 aaPredicted RBP13.39□□□□□ -0.27
TPM1-230ENST00000561266 RHOJQ9H4E5 214 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 RARRES3Q9UL19 164 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 CHD6Q8TD26 2715 aa13.39□□□□□ -0.27
TPM1-230ENST00000561266 IGKV1-8A0A0C4DH67 115 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 TMEM150CB9EJG8 249 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 E7ENX8 843 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 CTSVO60911 334 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 SYF2O95926 243 aaKnown RBP13.38□□□□□ -0.27
TPM1-230ENST00000561266 CATP04040 527 aaKnown RBP13.38□□□□□ -0.27
TPM1-230ENST00000561266 GSTA2P09210 222 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 LIFP15018 202 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 CD82P27701 267 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 IMPA1P29218 277 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 OAS2P29728 719 aaKnown RBP13.38□□□□□ -0.27
TPM1-230ENST00000561266 SKIV2L2P42285 1042 aaKnown RBP13.38□□□□□ -0.27
TPM1-230ENST00000561266 ARL4DP49703 201 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 PNLIPRP1P54315 467 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 ACY1Q03154 408 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 TAP2Q03519 686 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 PDAP1Q13442 181 aaKnown RBP13.38□□□□□ -0.27
TPM1-230ENST00000561266 GLE1Q53GS7 698 aaKnown RBP13.38□□□□□ -0.27
TPM1-230ENST00000561266 ARHGAP40Q5TG30 622 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 UGT3A1Q6NUS8 523 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 TTC23LQ6PF05 361 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 FIGLAQ6QHK4 219 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 CACNA2D3Q8IZS8 1091 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 PPM1NQ8N819 430 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 CCNL2Q96S94 520 aaPredicted RBP13.38□□□□□ -0.27
TPM1-230ENST00000561266 RBBP8Q99708 897 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 ZPBPQ9BS86 351 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 ACAT2Q9BWD1 397 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 ULBP3Q9BZM4 244 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 UNKQ9C0B0 810 aaKnown RBP13.38□□□□□ -0.27
TPM1-230ENST00000561266 L2HGDHQ9H9P8 463 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 PDE7BQ9NP56 450 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 SLC6A20Q9NP91 592 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 SPATA7Q9P0W8 599 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 IL17BQ9UHF5 180 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 CORO1CQ9ULV4 474 aaPredicted RBP13.38□□□□□ -0.27
TPM1-230ENST00000561266 SH2B3Q9UQQ2 575 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 PCDHB11Q9Y5F2 797 aa13.38□□□□□ -0.27
TPM1-230ENST00000561266 HMX2A2RU54 273 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 EIF3FO00303 357 aaPredicted RBP13.37□□□□□ -0.27
TPM1-230ENST00000561266 CDC7O00311 574 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 TERTO14746 1132 aaKnown RBP13.37□□□□□ -0.27
TPM1-230ENST00000561266 PHGDHO43175 533 aaKnown RBP13.37□□□□□ -0.27
TPM1-230ENST00000561266 FAM153BP0C7A2 387 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 ZNF37AP17032 561 aaPredicted RBP13.37□□□□□ -0.27
TPM1-230ENST00000561266 CXADRP78310 365 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 GPS2Q13227 327 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 SF1Q15637 639 aaKnown RBP13.37□□□□□ -0.27
TPM1-230ENST00000561266 FAM153CQ494X1 144 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 FAM199XQ6PEV8 388 aaPredicted RBP13.37□□□□□ -0.27
TPM1-230ENST00000561266 RELL1Q8IUW5 271 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 TMEM151BQ8IW70 566 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 CTAGE3PQ8IX95 158 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 NLGN4XQ8N0W4 816 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 SPATA6LQ8N4H0 392 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 NLGN4YQ8NFZ3 816 aaPredicted RBP13.37□□□□□ -0.27
TPM1-230ENST00000561266 OR2L3Q8NG85 312 aa13.37□□□□□ -0.27
TPM1-230ENST00000561266 GABPB2Q8TAK5 448 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms