RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SMCO3A2RU48 225 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 GSAPA4D1B5 854 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 TMEM8BA6NDV4 472 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 HELTA6NFD8 242 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MROH6A6NGR9 719 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PRR19A6NJB7 356 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ZSCAN5BA6NJL1 495 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 BECN2A8MW95 431 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 TMEM150CB9EJG8 249 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 TMEM189-UBE2V1I3L0A0 370 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 IFNL4K9M1U5 179 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 KIF2AO00139 706 aaPredicted RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 RFXAPO00287 272 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MATN2O00339 956 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ZNF197O14709 1029 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 YY2O15391 372 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SPINT2O43291 252 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ACSL4O60488 711 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SNX3O60493 162 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SEMA7AO75326 666 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 NME6O75414 186 aaPredicted RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 GRAP2O75791 330 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 KRT34O76011 436 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SCGNO76038 276 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 NDUFA10O95299 355 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 GDF11O95390 407 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MT-CO3P00414 261 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PAHP00439 452 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 KRT14P02533 472 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 CXCL10P02778 98 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PRNPP04156 253 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ERBB2P04626 1255 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 TPM3P06753 285 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 CA3P07451 260 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 RNASE1P07998 156 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 FGF4P08620 206 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MMP10P09238 476 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 H2AFB1P0C5Y9 115 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 H2AFB2P0C5Z0 115 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ANKRD34CP0C6C1 535 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 RFPL3SP0C7P2 107 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 UQCRFS1P1P0C7P4 283 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ELFN1P0C7U0 828 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SP9P0CG40 484 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 FCGR1AP12314 374 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SKILP12757 684 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 IRF2P14316 349 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 TCF4P15884 667 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SRD5A1P18405 259 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 EIF2S2P20042 333 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 CD22P20273 847 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 FPR3P25089 353 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 DDX6P26196 483 aaKnown RBP eCLIP1.97□□□□□ -2.09
RTF1-207ENST00000561076 COL8A1P27658 744 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 CHATP28329 748 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 HOXD10P28358 340 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PRDX6P30041 224 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 NMT1P30419 496 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 SSTR1P30872 391 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 TIA1P31483 386 aaKnown RBP eCLIP1.97□□□□□ -2.09
RTF1-207ENST00000561076 CCR1P32246 355 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 RYKP34925 604 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 BMI1P35226 326 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 DLSTP36957 453 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SLC1A3P43003 542 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 LHX1P48742 406 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 NR2C2P49116 596 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 METAP2P50579 478 aaKnown RBP eCLIP1.97□□□□□ -2.09
RTF1-207ENST00000561076 SCNN1GP51170 649 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MMP15P51511 669 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ZNF84P51523 738 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 METAP1P53582 386 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 GEMP55040 296 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SOX10P56693 466 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MAP3K7CLP57077 242 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 TMPRSS3P57727 454 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 CARD18P57730 90 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 TGFB2P61812 414 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 POLR2LP62875 67 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 TPM4P67936 248 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 CSNK2A1P68400 391 aaPredicted RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 CBX1P83916 185 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PSG6Q00889 435 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SLC3A1Q07837 685 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 IL10RBQ08334 325 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 DMP1Q13316 513 aaPredicted RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 UBE2V1Q13404 147 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 IDI1Q13907 227 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ARHGAP19Q14CB8 494 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 STK38Q15208 465 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ANGPT1Q15389 498 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 DECR1Q16698 335 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MSMPQ1L6U9 139 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 EXOC3L2Q2M3D2 409 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ZNF792Q3KQV3 632 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 CERKLQ49MI3 558 aaPredicted RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 EPC2Q52LR7 807 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PRSS36Q5K4E3 855 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PRR31Q5SQ13 230 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PHYHD1Q5SRE7 291 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms