RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 RPN2P04844 631 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 C8GP07360 202 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 ZNF28P17035 718 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 PHBP35232 272 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 SPRP35270 261 aaPredicted RBP11.03□□□□□ -0.64
SNX1-204ENST00000559061 HSD17B3P37058 310 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 TSPAN7P41732 249 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 PNLIPRP1P54315 467 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 MC2RQ01718 297 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 EIF3IQ13347 325 aaKnown RBP11.03□□□□□ -0.64
SNX1-204ENST00000559061 KIR2DS3Q14952 304 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 TSNQ15631 228 aaKnown RBP11.03□□□□□ -0.64
SNX1-204ENST00000559061 SLC5A12Q1EHB4 618 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 C18orf21Q32NC0 220 aaPredicted RBP11.03□□□□□ -0.64
SNX1-204ENST00000559061 TBC1D25Q3MII6 688 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 ANKS6Q68DC2 871 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 FOXR1Q6PIV2 292 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 SUSD1Q6UWL2 747 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 CDHR3Q6ZTQ4 885 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 MYO1HQ8N1T3 1032 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 PLD6Q8N2A8 252 aaKnown RBP11.03□□□□□ -0.64
SNX1-204ENST00000559061 KDF1Q8NAX2 398 aaPredicted RBP11.03□□□□□ -0.64
SNX1-204ENST00000559061 AGBL5Q8NDL9 886 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 USP7Q93009 1102 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 FOPNLQ96NB1 174 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 CMKLR1Q99788 373 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 CTRCQ99895 268 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 DERL2Q9GZP9 239 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 ZMYND15Q9H091 742 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 PARVBQ9HBI1 364 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 C1GALT1Q9NS00 363 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 ZNF180Q9UJW8 692 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 B3GALT1Q9Y5Z6 326 aa11.03□□□□□ -0.64
SNX1-204ENST00000559061 MDC1Q14676 2089 aaKnown RBP11.02□□□□□ -0.64
SNX1-204ENST00000559061 USP24Q9UPU5 2620 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 A0A0J9YY10 115 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 POC1B-GALNT4F8VUJ3 575 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 TMX2-CTNND1H3BSU7 103 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 MATN2O00339 956 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 RASSF9O75901 435 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 C2P06681 752 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 CCDC166P0CW27 439 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 STMN1P16949 149 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 MAGP20916 626 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 SLC5A2P31639 672 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 RGS4P49798 205 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 SNRPNP63162 240 aaKnown RBP11.02□□□□□ -0.65
SNX1-204ENST00000559061 COL9A2Q14055 689 aaPredicted RBP11.02□□□□□ -0.65
SNX1-204ENST00000559061 CSHL1Q14406 222 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 ARHGAP19Q14CB8 494 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 GPR19Q15760 415 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 PRAMEF17Q5VTA0 474 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 LRRC8EQ6NSJ5 796 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 KLHL35Q6PF15 583 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 ADGRD1Q6QNK2 874 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 ISCA2Q86U28 154 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 FAM129CQ86XR2 697 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 CARFQ8N187 725 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 C19orf47Q8N9M1 422 aaKnown RBP11.02□□□□□ -0.65
SNX1-204ENST00000559061 OR2L3Q8NG85 312 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 KCTD4Q8WVF5 259 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 ANKRD7Q92527 254 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 UBXN4Q92575 508 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 CAVIN3Q969G5 261 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 ZNF501Q96CX3 271 aaPredicted RBP11.02□□□□□ -0.65
SNX1-204ENST00000559061 OR4K3Q96R72 315 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 ZNF358Q9NW07 568 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 TXNDC16Q9P2K2 825 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 ACSL6Q9UKU0 697 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 NOVA2Q9UNW9 492 aaKnown RBP11.02□□□□□ -0.65
SNX1-204ENST00000559061 ASB1Q9Y576 335 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 PCDHGA3Q9Y5H0 932 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 KLK4Q9Y5K2 254 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 ACACBO00763 2458 aa11.02□□□□□ -0.65
SNX1-204ENST00000559061 EXOC1LA0A1B0GW35 172 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 ISM1B1AKI9 464 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 CTSVO60911 334 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 RFPL1O75677 317 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 ZBTB11O95625 1053 aaPredicted RBP11.01□□□□□ -0.65
SNX1-204ENST00000559061 SYF2O95926 243 aaKnown RBP11.01□□□□□ -0.65
SNX1-204ENST00000559061 MTHFD2P13995 350 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 CDH3P22223 829 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 OAS2P29728 719 aaKnown RBP11.01□□□□□ -0.65
SNX1-204ENST00000559061 CSTF2P33240 577 aaKnown RBP eCLIP11.01□□□□□ -0.65
SNX1-204ENST00000559061 GRIA3P42263 894 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 GCGRP47871 477 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 PPM1FP49593 454 aaPredicted RBP11.01□□□□□ -0.65
SNX1-204ENST00000559061 MAPK10P53779 464 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 TBPL1P62380 186 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 HSD11B2P80365 405 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 PRKAA1Q13131 559 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 SRSF6Q13247 344 aaKnown RBP11.01□□□□□ -0.65
SNX1-204ENST00000559061 DEFB110Q30KQ9 67 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 ZNF425Q6IV72 752 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 SH2D5Q6ZV89 423 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 PROSER1Q86XN7 944 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 KMT5CQ86Y97 462 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 CYP4X1Q8N118 509 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 DNAJC22Q8N4W6 341 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 NKAPQ8N5F7 415 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms