RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 FKBP10Q96AY3 582 aa13.08□□□□□ -0.32
SNRPA1-204ENST00000558020 WDR54Q9H977 334 aa13.08□□□□□ -0.32
SNRPA1-204ENST00000558020 EIF2B3Q9NR50 452 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-204ENST00000558020 HOMER3Q9NSC5 361 aa13.08□□□□□ -0.32
SNRPA1-204ENST00000558020 NXT1Q9UKK6 140 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-204ENST00000558020 TTC7AQ9ULT0 858 aaPredicted RBP13.08□□□□□ -0.32
SNRPA1-204ENST00000558020 USP9XQ93008 2570 aaPredicted RBP13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 A0A0U1RQJ8 604 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 IQCF5A8MTL0 148 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 H3BMM5 538 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 AGPSO00116 658 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 ETS1P14921 441 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 MMP11P24347 488 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 RPL22P35268 128 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 UQCRFS1P47985 274 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 SARNPP82979 210 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 CDK16Q00536 496 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 SLC9A5Q14940 896 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 NAA25Q14CX7 972 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 PLEKHN1Q494U1 663 aaPredicted RBP13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 MEI1Q5TIA1 1274 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 DRICH1Q6PGQ1 229 aaPredicted RBP13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 VRK3Q8IV63 474 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 C2orf73Q8N5S3 287 aaPredicted RBP13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 OTUD6BQ8N6M0 293 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 TTC29Q8NA56 475 aaPredicted RBP13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 LINC01555Q8NAE3 123 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 SSC4DQ8WTU2 575 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 TCF12Q99081 682 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 SELENOSQ9BQE4 189 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 ILKAPQ9H0C8 392 aaPredicted RBP13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 MRM3Q9HC36 420 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 LUZP4Q9P127 313 aa13.07□□□□□ -0.32
SNRPA1-204ENST00000558020 TCP11X1B4DZS4 312 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 DSCR3O14972 297 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 DDAH2O95865 285 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 ONECUT2O95948 504 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 RPS3P23396 243 aaKnown RBP eCLIP13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 PEBP1P30086 187 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 GRIA3P42263 894 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 BASP1P80723 227 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 ELOAQ14241 798 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 SEMA3AQ14563 771 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 RNF187Q5TA31 235 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 PPP1R32Q7Z5V6 425 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 LDB1Q86U70 411 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 FAM20CQ8IXL6 584 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 KRT222Q8N1A0 295 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 LMNTD1Q8N9Z9 388 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 Q8NA96 180 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 PRR7Q8TB68 274 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 COG1Q8WTW3 980 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 CUTCQ9NTM9 273 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 CDC23Q9UJX2 597 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 KLHL20Q9Y2M5 609 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 FAM169AQ9Y6X4 670 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 ESPL1Q14674 2120 aa13.06□□□□□ -0.32
SNRPA1-204ENST00000558020 C1orf105O95561 183 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 CTSBP07858 339 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 UMODP07911 640 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 ZSCAN5DPP0CG00 497 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 ITGA3P26006 1051 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 EIF3BP55884 814 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 GRB7Q14451 532 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 EIF2S3LQ2VIR3 472 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 AGAP7PQ5VUJ5 663 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 ARMC3Q5W041 872 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 PRUNE1Q86TP1 453 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 TAX1BP1Q86VP1 789 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 HMGCLL1Q8TB92 370 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 AGAP4Q96P64 663 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 MENTQ9BUN1 341 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 P2RY12Q9H244 342 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 SLC26A1Q9H2B4 701 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 ZNF552Q9H707 407 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 ENAMQ9NRM1 1142 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 AGPAT4Q9NRZ5 378 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 TREX1Q9NSU2 369 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 UTP6Q9NYH9 597 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 MARCH4Q9P2E8 410 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 PLEKHB1Q9UF11 243 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 CIDEBQ9UHD4 219 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 VPS9D1Q9Y2B5 631 aa13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 COPG1Q9Y678 874 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-204ENST00000558020 HYKKA2RU49 373 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 VAPBO95292 243 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 ESR1P03372 595 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 PAMP19021 973 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 CHRM3P20309 590 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 CRADDP78560 199 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 OCA2Q04671 838 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 NKG7Q16617 165 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 WASHC2DQ5SRD0 308 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 PRAMEF13Q5VWM6 474 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 FCRL6Q6DN72 434 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 PRMT9Q6P2P2 845 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 CISD2Q8N5K1 135 aaKnown RBP13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 LKAAEAR1Q8TD35 194 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 SNRNP40Q96DI7 357 aaKnown RBP13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 IL17FQ96PD4 163 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms