RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 SPIBQ01892 262 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 SULT2A1Q06520 285 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 IL10RBQ08334 325 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 IL24Q13007 206 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 VEZF1Q14119 521 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 CARTPTQ16568 116 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 SMTNL2Q2TAL5 461 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 MCMDC2Q4G0Z9 681 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 SPATA46Q5T0L3 261 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 AKNAD1Q5T1N1 836 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 PRAMEF17Q5VTA0 474 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 ARHGEF16Q5VV41 709 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 AGAP6Q5VW22 663 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 PRAMEF7Q5VXH5 474 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 Q6YL49 198 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 MON1BQ7L1V2 547 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 MRGPREQ86SM8 312 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 COMMD2Q86X83 199 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 FAM114A1Q8IWE2 563 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 APCDD1Q8J025 514 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 ARHGAP24Q8N264 748 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 RNF148Q8N7C7 305 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 RASGEF1AQ8N9B8 481 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 FAM71CQ8NEG0 241 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 OR56B2PQ8NGI1 322 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 OR5M8Q8NGP6 311 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 OR14A16Q8NHC5 309 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 RNF139Q8WU17 664 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 U2AF1L4Q8WU68 220 aaKnown RBP3.62□□□□□ -1.83
TDP1-217ENST00000557782 CCDC107Q8WV48 283 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 EXTL1Q92935 676 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 ESAMQ96AP7 390 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 THOC1Q96FV9 657 aaKnown RBP3.62□□□□□ -1.83
TDP1-217ENST00000557782 GPA33Q99795 319 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 SH2D3AQ9BRG2 576 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 TM6SF1Q9BZW5 370 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 RAB33BQ9H082 229 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 NCOR1P1Q9H4R4 102 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 TMEM231Q9H6L2 316 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 SLA2Q9H6Q3 261 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 RMND5AQ9H871 391 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 LRRC40Q9H9A6 602 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 CLK4Q9HAZ1 481 aaKnown RBP3.62□□□□□ -1.83
TDP1-217ENST00000557782 VAT1LQ9HCJ6 419 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 Q9N2K0 584 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 GSN-AS1Q9NRJ2 163 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 HOMER3Q9NSC5 361 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 TMEM45AQ9NWC5 275 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 SYBUQ9NX95 663 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 ARPP21Q9UBL0 812 aaPredicted RBP3.62□□□□□ -1.83
TDP1-217ENST00000557782 ATP6V1HQ9UI12 483 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 RUVBL2Q9Y230 463 aaKnown RBP3.62□□□□□ -1.83
TDP1-217ENST00000557782 CAB39Q9Y376 341 aaPredicted RBP3.62□□□□□ -1.83
TDP1-217ENST00000557782 LOXL2Q9Y4K0 774 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 ASB3Q9Y575 518 aa3.62□□□□□ -1.83
TDP1-217ENST00000557782 POLR2AP24928 1970 aaKnown RBP3.62□□□□□ -1.83
TDP1-217ENST00000557782 TRBV5-3A0A0A0MS03 114 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 A0A1W2PPK0 400 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 TMEM129A0AVI4 362 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 MAGEB16A2A368 324 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 CTAGE15A4D2H0 777 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 EME2A4GXA9 379 aaPredicted RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 ZSCAN5CA6NGD5 496 aaPredicted RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 ANKDD1BA6NHY2 528 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 F8VVB4 439 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 F8VWA3 439 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 H0YIG0 161 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 CXCL11O14625 94 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 CASQ2O14958 399 aaPredicted RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 MAPK13O15264 365 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 HSPA12AO43301 675 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 BUD23O43709 281 aaKnown RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 GPR137BO60478 399 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 FOXD2O60548 495 aaPredicted RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 ATP6AP2O75787 350 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 ADCY5O95622 1261 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 ITGB3P05106 788 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 CTAGE8P0CG41 777 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 HAPLN1P10915 354 aaPredicted RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 EPB41P11171 864 aaKnown RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 RALAP11233 206 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 FUT1P19526 365 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 RPL3P39023 403 aaKnown RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 OR3A1P47881 315 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 RPS13P62277 151 aaKnown RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 CCNA1P78396 465 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 GABPB1Q06547 395 aaPredicted RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 COX10Q12887 443 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 LAMB3Q13751 1172 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 RBBP7Q16576 425 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 DUSP6Q16828 381 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 CCDC142Q17RM4 750 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 NADK2Q4G0N4 442 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 SYT14P1Q58G82 188 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 PIK3CD-AS1Q5SR53 167 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 LDLRAP1Q5SW96 308 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 PM20D1Q6GTS8 502 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 CD164L2Q6UWJ8 174 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 CCBE1Q6UXH8 406 aaPredicted RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 ZNF793Q6ZN11 406 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms