RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 TYSND1Q2T9J0 566 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 ZC3H12BQ5HYM0 836 aaKnown RBP13.61□□□□□ -0.23
SNX6-210ENST00000557341 DCAF10Q5QP82 559 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 VWA5B1Q5TIE3 1220 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 JMJD6Q6NYC1 403 aaPredicted RBP13.61□□□□□ -0.23
SNX6-210ENST00000557341 MRPL14Q6P1L8 145 aaKnown RBP13.61□□□□□ -0.23
SNX6-210ENST00000557341 LRRC8BQ6P9F7 803 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 CNSTQ6PJW8 725 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 GALNT11Q8NCW6 608 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 FKBP10Q96AY3 582 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 MFSD3Q96ES6 412 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 FOPNLQ96NB1 174 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 KIFC1Q9BW19 673 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 TTC7AQ9ULT0 858 aaPredicted RBP13.61□□□□□ -0.23
SNX6-210ENST00000557341 SOX13Q9UN79 622 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 NFS1Q9Y697 457 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 HIVEP3Q5T1R4 2406 aa13.61□□□□□ -0.23
SNX6-210ENST00000557341 CEP104O60308 925 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 KLHL41O60662 606 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 CNOT3O75175 753 aaKnown RBP13.6□□□□□ -0.23
SNX6-210ENST00000557341 VAPBO95292 243 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 C1orf105O95561 183 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 ALPPP05187 535 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 ALAS2P22557 587 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 ARNTP27540 789 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 CCNFP41002 786 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 GCGRP47871 477 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 KCNJ1P48048 391 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 SRSF1Q07955 248 aaKnown RBP eCLIP13.6□□□□□ -0.232e-6■□□□□ 11.1
SNX6-210ENST00000557341 RAPSNQ13702 412 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 GRM7Q14831 915 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 CYP2A13Q16696 494 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 TCTE1Q5JU00 501 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 CTSL3PQ5NE16 218 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 YOD1Q5VVQ6 348 aaPredicted RBP13.6□□□□□ -0.23
SNX6-210ENST00000557341 SLC6A19Q695T7 634 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 TTLL10Q6ZVT0 673 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 SDCCAG8Q86SQ7 713 aaPredicted RBP13.6□□□□□ -0.23
SNX6-210ENST00000557341 MCATQ8IVS2 390 aaKnown RBP13.6□□□□□ -0.23
SNX6-210ENST00000557341 CPAMD8Q8IZJ3 1885 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 LMNTD1Q8N9Z9 388 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 MAGEC3Q8TD91 643 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 PNPLA2Q96AD5 504 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 PTERQ96BW5 349 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 SLAMF7Q9NQ25 335 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 P4HTMQ9NXG6 502 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 SPATA7Q9P0W8 599 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 C5AR2Q9P296 337 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 RUVBL2Q9Y230 463 aaKnown RBP13.6□□□□□ -0.23
SNX6-210ENST00000557341 MAP4K5Q9Y4K4 846 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 FAM169AQ9Y6X4 670 aa13.6□□□□□ -0.23
SNX6-210ENST00000557341 TARM1B6A8C7 271 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 H3BMM5 538 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 DSCR3O14972 297 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 ESR1P03372 595 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 UMODP07911 640 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 PIM1P11309 404 aaPredicted RBP13.59□□□□□ -0.23
SNX6-210ENST00000557341 PAMP19021 973 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 OGNP20774 298 aaKnown RBP13.59□□□□□ -0.23
SNX6-210ENST00000557341 GNLYP22749 145 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 PSMB5P28074 263 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 ATP5DP30049 168 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 CXCR5P32302 372 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 ADARP55265 1226 aaKnown RBP13.59□□□□□ -0.23
SNX6-210ENST00000557341 SARNPP82979 210 aaKnown RBP13.59□□□□□ -0.23
SNX6-210ENST00000557341 MYBPC3Q14896 1274 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 NAA25Q14CX7 972 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 ARMC3Q5W041 872 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 FCRL6Q6DN72 434 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 KIAA0930Q6ICG6 404 aaPredicted RBP13.59□□□□□ -0.23
SNX6-210ENST00000557341 FIGLAQ6QHK4 219 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 PPP1R32Q7Z5V6 425 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 GALNT16Q8N428 558 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 RBMXL3Q8N7X1 1067 aaKnown RBP13.59□□□□□ -0.23
SNX6-210ENST00000557341 TTC29Q8NA56 475 aaPredicted RBP13.59□□□□□ -0.23
SNX6-210ENST00000557341 Q8NA96 180 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 HMGCLL1Q8TB92 370 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 LPGAT1Q92604 370 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 ZUFSPQ96AP4 578 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 BIRC8Q96P09 236 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 TCF12Q99081 682 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 SELENOSQ9BQE4 189 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 MFRPQ9BY79 579 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 SLC29A3Q9BZD2 475 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 WDR54Q9H977 334 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 SLC22A11Q9NSA0 550 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 CUTCQ9NTM9 273 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 LUZP4Q9P127 313 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 ICE1Q9Y2F5 2266 aa13.59□□□□□ -0.23
SNX6-210ENST00000557341 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.58□□□□□ -0.24
SNX6-210ENST00000557341 TCRBV7S3A2A0A539 114 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 KRT87PA6NCN2 255 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 GOLGA8KD6RF30 607 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 GOLGA8TH3BQL2 631 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 AGPSO00116 658 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 NRDCO43847 1150 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 PRICKLE3O43900 615 aaPredicted RBP13.58□□□□□ -0.24
SNX6-210ENST00000557341 NIPSNAP2O75323 286 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 IPO13O94829 963 aaKnown RBP13.58□□□□□ -0.24
SNX6-210ENST00000557341 ALBP02768 609 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms