RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 CYP2U1Q7Z449 544 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 TRIM74Q86UV6 250 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 DTD2Q96FN9 168 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 EGLN2Q96KS0 407 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 NSMCE2Q96MF7 247 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 FRG2BQ96QU4 278 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 CCM2Q9BSQ5 444 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.6■■□□□ 1.37
TMEM260-207ENST00000555497 MAGEL2Q9UJ55 1249 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 PPT2Q9UMR5 302 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 ATG13O75143 517 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 RB1P06400 928 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 POU2F2P09086 479 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 JUPP14923 745 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 SDC1P18827 310 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 GGT1P19440 569 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 PRPH2P23942 346 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 PBLDP30039 288 aaPredicted RBP23.6■■□□□ 1.37
TMEM260-207ENST00000555497 CYP4F3Q08477 520 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 ATP6AP1Q15904 470 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 THOC6Q86W42 341 aaKnown RBP23.6■■□□□ 1.37
TMEM260-207ENST00000555497 OR10A6Q8NH74 314 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 TMEM159Q96B96 161 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 CMTM7Q96FZ5 175 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 SH3GL3Q99963 347 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 CENPKQ9BS16 269 aa23.6■■□□□ 1.37
TMEM260-207ENST00000555497 TRBV5-3A0A0A0MS03 114 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 AHCYL1O43865 530 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 TNFAIP8O95379 198 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 CA3P07451 260 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 NELFEP18615 380 aaKnown RBP23.59■■□□□ 1.37
TMEM260-207ENST00000555497 PLOD1Q02809 727 aaPredicted RBP23.59■■□□□ 1.37
TMEM260-207ENST00000555497 FNDC3BQ53EP0 1204 aaKnown RBP23.59■■□□□ 1.37
TMEM260-207ENST00000555497 RUNDC3AQ59EK9 446 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 SATL1Q86VE3 508 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 NPAS3Q8IXF0 933 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 TBC1D21Q8IYX1 336 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 NRSN1Q8IZ57 195 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 OR4K3Q96R72 315 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 PRPF18Q99633 342 aaKnown RBP23.59■■□□□ 1.37
TMEM260-207ENST00000555497 THUMPD3Q9BV44 507 aaKnown RBP23.59■■□□□ 1.37
TMEM260-207ENST00000555497 SERHLQ9NQF3 203 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 STOX2Q9P2F5 926 aaPredicted RBP23.59■■□□□ 1.37
TMEM260-207ENST00000555497 NPC1O15118 1278 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 TFAP2AP05549 437 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 LBX1P52954 281 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 ZNF658BQ4V348 819 aaPredicted RBP23.59■■□□□ 1.37
TMEM260-207ENST00000555497 SPRED1Q7Z699 444 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 RIMKLAQ8IXN7 391 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 SPDYE1Q8NFV5 336 aaPredicted RBP23.59■■□□□ 1.37
TMEM260-207ENST00000555497 BPIFB1Q8TDL5 484 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 GLMNQ92990 594 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 ERLEC1Q96DZ1 483 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 CHID1Q9BWS9 393 aa23.59■■□□□ 1.37
TMEM260-207ENST00000555497 PAIP1Q9H074 479 aaKnown RBP23.59■■□□□ 1.37
TMEM260-207ENST00000555497 MUC22E2RYF6 1773 aaPredicted RBP23.58■■□□□ 1.37
TMEM260-207ENST00000555497 ATG2AQ2TAZ0 1938 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 KANSL1LA0AUZ9 987 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 E7EQ34 232 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 QSOX1O00391 747 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 AMD1P17707 334 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 MAP4P27816 1152 aaKnown RBP23.58■■□□□ 1.37
TMEM260-207ENST00000555497 IRF8Q02556 426 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 NAE1Q13564 534 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 AGTRAPQ6RW13 159 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 NLRP8Q86W28 1048 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 MFSD2AQ8NA29 543 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 ZNF548Q8NEK5 533 aaPredicted RBP23.58■■□□□ 1.37
TMEM260-207ENST00000555497 TFAP2CQ92754 450 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 APOLD1Q96LR9 279 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 RNF145Q96MT1 663 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 ASB16Q96NS5 453 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 INPP5KQ9BT40 448 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 CARS2Q9HA77 564 aaKnown RBP23.58■■□□□ 1.37
TMEM260-207ENST00000555497 HPS4Q9NQG7 708 aa23.58■■□□□ 1.37
TMEM260-207ENST00000555497 NPIPB8E9PQR5 432 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 LRATO95237 230 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 PRNPP04156 253 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 PRPS2P11908 318 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 GPM6BQ13491 265 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 HNRNPA1L2Q32P51 320 aaKnown RBP23.57■■□□□ 1.36
TMEM260-207ENST00000555497 PHACTR4Q8IZ21 702 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 C10orf111Q8N326 155 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 PACRGLQ8N7B6 248 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 OR2T12Q8NG77 320 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 FAM129BQ96TA1 746 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 PKP4Q99569 1192 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 PCDHB14Q9Y5E9 798 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 SERTM1A2A2V5 107 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 HEPACAM2A8MVW5 462 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 PSMD11O00231 422 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 ANXA6P08133 673 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 PABPC4LP0CB38 370 aaKnown RBP23.57■■□□□ 1.36
TMEM260-207ENST00000555497 FCGR1AP12314 374 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 KCNC3Q14003 757 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 DOC2AQ14183 400 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 XKR6Q5GH73 641 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 ANKRD46Q86W74 232 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 HOMEZQ8IX15 550 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 FAM86B1Q8N7N1 296 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms