RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 TRIM55Q9BYV6 548 aa13.61□□□□□ -0.23
SPTLC2-202ENST00000554365 P2RY12Q9H244 342 aa13.61□□□□□ -0.23
SPTLC2-202ENST00000554365 RHOJQ9H4E5 214 aa13.61□□□□□ -0.23
SPTLC2-202ENST00000554365 PPCSQ9HAB8 311 aa13.61□□□□□ -0.23
SPTLC2-202ENST00000554365 ZDHHC3Q9NYG2 299 aa13.61□□□□□ -0.23
SPTLC2-202ENST00000554365 LGALS13Q9UHV8 139 aa13.61□□□□□ -0.23
SPTLC2-202ENST00000554365 RARRES3Q9UL19 164 aa13.61□□□□□ -0.23
SPTLC2-202ENST00000554365 IGHV5-51A0A0C4DH38 117 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 SMIM23A6NLE4 172 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 C21orf140B9A014 251 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 SGTAO43765 313 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 RECKO95980 971 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 INHBAP08476 426 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 FOLR1P15328 257 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 HALP42357 657 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 CD151P48509 253 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 ARL4DP49703 201 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 PPP1CAP62136 330 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 RPS18P62269 152 aaKnown RBP13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 TIAL1Q01085 375 aaKnown RBP eCLIP13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 CHAF1BQ13112 559 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 GTF2H3Q13889 308 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 ITIH4Q14624 930 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 TNFAIP8L3Q5GJ75 292 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 CTSL3PQ5NE16 218 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 RBM20Q5T481 1227 aaKnown RBP13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 FHL5Q5TD97 284 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 AGAP9Q5VTM2 703 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 LYPLAL1Q5VWZ2 237 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 PWWP2BQ6NUJ5 590 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 FAM199XQ6PEV8 388 aaPredicted RBP13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 APLFQ8IW19 511 aaPredicted RBP13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 CPT1CQ8TCG5 803 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 NAT14Q8WUY8 206 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 VPS39Q96JC1 886 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 BIRC8Q96P09 236 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 SH3GL2Q99962 352 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 AKIRIN1Q9H9L7 192 aaPredicted RBP13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 PSMC3IPQ9P2W1 217 aaPredicted RBP13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 PLEKHB1Q9UF11 243 aaPredicted RBP13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 EPHA6Q9UF33 1036 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 WDR37Q9Y2I8 494 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 MED16Q9Y2X0 877 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 MTO1Q9Y2Z2 717 aaKnown RBP13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 PRSS21Q9Y6M0 314 aa13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 USP9YO00507 2555 aaPredicted RBP13.6□□□□□ -0.23
SPTLC2-202ENST00000554365 UTP20O75691 2785 aaKnown RBP13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 TLDC2A0PJX2 215 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 FOXO6A8MYZ6 492 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 ATP8B1O43520 1251 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 CDH16O75309 829 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 NDUFS3O75489 264 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 RPS3P23396 243 aaKnown RBP eCLIP13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 SERPINB9P50453 376 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 CCL11P51671 97 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 PGDP52209 483 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 ADARP55265 1226 aaKnown RBP13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 TMEM115Q12893 351 aaPredicted RBP13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 BMPR2Q13873 1038 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 KRT71Q3SY84 523 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 LDLRAP1Q5SW96 308 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 RNF187Q5TA31 235 aaPredicted RBP13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 CPZQ66K79 652 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 CAPRIN2Q6IMN6 1127 aaKnown RBP13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 WASH2PQ6VEQ5 465 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 C11orf96Q7Z7L8 435 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 SPNS2Q8IVW8 549 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 RIBC1Q8N443 379 aaPredicted RBP13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 GALNT11Q8NCW6 608 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 GABPB2Q8TAK5 448 aaPredicted RBP13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 SLC41A2Q96JW4 573 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 COPS8Q99627 209 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 GPR22Q99680 433 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 RAB33BQ9H082 229 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 TMBIM4Q9HC24 238 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 WASH6PQ9NQA3 447 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 PSMD13Q9UNM6 376 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 CRYL1Q9Y2S2 319 aa13.59□□□□□ -0.23
SPTLC2-202ENST00000554365 ARGFXA6NJG6 315 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 PRMT5O14744 637 aaPredicted RBP13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 EBLN1P0CF75 366 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 PTPN4P29074 926 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 SPRP35270 261 aaPredicted RBP13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 RPS15P62841 145 aaKnown RBP13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 ACY1Q03154 408 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 PLCL1Q15111 1095 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 TMED2Q15363 201 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 UGT8Q16880 541 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 NADK2Q4G0N4 442 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 KLHL35Q6PF15 583 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 CLDN19Q8N6F1 224 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 RASGEF1AQ8N9B8 481 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 LKAAEAR1Q8TD35 194 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 THAP4Q8WY91 577 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 ISL2Q96A47 359 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 NDNQ99608 321 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 MAP3K3Q99759 626 aa13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 AARSD1Q9BTE6 412 aaKnown RBP13.58□□□□□ -0.24
SPTLC2-202ENST00000554365 SLC25A23Q9BV35 468 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms