RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 FITM1A5D6W6 292 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 H3BMM5 538 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 PEX12O00623 359 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 RASGRF2O14827 1237 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 PFDN6O15212 129 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 ZNF185O15231 689 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 HCRTR1O43613 425 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 PRICKLE3O43900 615 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 SRPX2O60687 465 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 VPS4BO75351 444 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 IPO13O94829 963 aaKnown RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 ALPPP05187 535 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 PIM1P11309 404 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 GP1BBP13224 206 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 TCP1P17987 556 aaKnown RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 TPSB2P20231 275 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 MAGP20916 626 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 ATP5DP30049 168 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 CCNFP41002 786 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 SNX1Q13596 522 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 GBX1Q14549 363 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 GRM7Q14831 915 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 MYBPC3Q14896 1274 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 NAA25Q14CX7 972 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 TPSAB1Q15661 275 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 TYSND1Q2T9J0 566 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 DEFB110Q30KQ9 67 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 NKAIN1Q4KMZ8 207 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 TCTE1Q5JU00 501 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 DCAF10Q5QP82 559 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 RNF187Q5TA31 235 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 FAM69BQ5VUD6 431 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 PTRHD1Q6GMV3 140 aaKnown RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 TTC23LQ6PF05 361 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 NAPRTQ6XQN6 538 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 VRK3Q8IV63 474 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 MCATQ8IVS2 390 aaKnown RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 RAB42Q8N4Z0 105 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 RBMXL3Q8N7X1 1067 aaKnown RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 LMNTD1Q8N9Z9 388 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 Q8NA96 180 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 LINC01555Q8NAE3 123 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 CLEC1AQ8NC01 280 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 GSDMBQ8TAX9 411 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 LKAAEAR1Q8TD35 194 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 MAGEC3Q8TD91 643 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 RAD51AP1Q96B01 352 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 KIFC1Q9BW19 673 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 CHRAC1Q9NRG0 131 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 CUEDC1Q9NWM3 386 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 IL1RAPL1Q9NZN1 696 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 SPATA7Q9P0W8 599 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 MARCH4Q9P2E8 410 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 IFT80Q9P2H3 777 aaPredicted RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 RNF14Q9UBS8 474 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 GNPTGQ9UJJ9 305 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 NXT1Q9UKK6 140 aaKnown RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 PLAGL1Q9UM63 463 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 VPS4AQ9UN37 437 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 PTRH2Q9Y3E5 179 aaKnown RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 UTP20O75691 2785 aaKnown RBP6.35□□□□□ -1.39
SLIRP-203ENST00000554074 SCN3AQ9NY46 2000 aa6.35□□□□□ -1.39
SLIRP-203ENST00000554074 CTAGE9A4FU28 777 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 IQCF5A8MTL0 148 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 AGPSO00116 658 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 DSCR3O14972 297 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 PHF2O75151 1096 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 CNOT3O75175 753 aaKnown RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 NDUFS3O75489 264 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 MATN4O95460 622 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 C1orf105O95561 183 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 ESR1P03372 595 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 UMODP07911 640 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 ZSCAN5DPP0CG00 497 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 ERGP11308 486 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 OGNP20774 298 aaKnown RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 MMP11P24347 488 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 ARNTP27540 789 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 NMBRP28336 390 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 OTX2P32243 289 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 MAGEA6P43360 314 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 EMP3P54852 163 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 CSE1LP55060 971 aaKnown RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 SESN2P58004 480 aaPredicted RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 BASP1P80723 227 aaKnown RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 SARNPP82979 210 aaKnown RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 AIMP2Q13155 320 aaKnown RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 SF1Q15637 639 aaKnown RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 INPP5JQ15735 1006 aaPredicted RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 FAM214AQ32MH5 1076 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 FHL5Q5TD97 284 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 C1orf189Q5VU69 101 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 MLIPQ5VWP3 458 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 SLC6A19Q695T7 634 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 FCRL6Q6DN72 434 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 KIAA0930Q6ICG6 404 aaPredicted RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 MRNIPQ6NTE8 343 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 LRRC8BQ6P9F7 803 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 FIGLAQ6QHK4 219 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 OTOAQ7RTW8 1153 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms