RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, human

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP1A-210	ENST00000551981	MYO7B	Q6PIF6	2116 aa		13.6	□□□□□ -0.23
CHMP1A-210	ENST00000551981	DCHS2	Q6V1P9	2916 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	DYTN	A2CJ06	578 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	MFAP3L	O75121	409 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	USP1	O94782	785 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	S1PR4	O95977	384 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	HP	P00738	406 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	ACPP	P15309	386 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	GRN	P28799	593 aa	Known RBP	13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	PTGER4	P35408	488 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	POU6F1	Q14863	301 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	FAM214A	Q32MH5	1076 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	C11orf63	Q6NUN7	778 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	COX15	Q7KZN9	410 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	NLRP9	Q7RTR0	991 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	GDF7	Q7Z4P5	450 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	FAM20C	Q8IXL6	584 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	KBTBD2	Q8IY47	623 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	STYX	Q8WUJ0	223 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	TTC1	Q99614	292 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	SELENOS	Q9BQE4	189 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	TRIM56	Q9BRZ2	755 aa	Known RBP	13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	LRRC40	Q9H9A6	602 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	EFR3B	Q9Y2G0	817 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	AKAP9	Q99996	3911 aa		13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.59	□□□□□ -0.23
CHMP1A-210	ENST00000551981	TRAV17	A0A0B4J275	112 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MAP2K7	O14733	419 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PCDH17	O14917	1159 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	TPH1	P17752	444 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CD9	P21926	228 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MSN	P26038	577 aa	Known RBP	13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MAGEA1	P43355	309 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	KCNK10	P57789	538 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	OCA2	Q04671	838 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981		Q0VFX4	171 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	SF1	Q15637	639 aa	Known RBP	13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MTFR2	Q6P444	385 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	NAPRT	Q6XQN6	538 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ARHGEF18	Q6ZSZ5	1173 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	METTL27	Q8N6F8	245 aa	Predicted RBP	13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CATSPER1	Q8NEC5	780 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	NR4A3	Q92570	626 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	KRT35	Q92764	455 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	TSSK1B	Q9BXA7	367 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ZNF160	Q9HCG1	818 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CHST11	Q9NPF2	352 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ENAM	Q9NRM1	1142 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	IMPACT	Q9P2X3	320 aa		13.58	□□□□□ -0.24
CHMP1A-210	ENST00000551981	FITM1	A5D6W6	292 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	VSTM2B	A6NLU5	285 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PJA2	O43164	708 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	KLHL18	O94889	574 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	FKBP9	O95302	570 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	UQCRH	P07919	91 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	FDXR	P22570	491 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MCM3	P25205	808 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CETN2	P41208	172 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	GRIA3	P42263	894 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	OR1D4	P47884	311 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CSE1L	P55060	971 aa	Known RBP	13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PRMT9	Q6P2P2	845 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	FIGLA	Q6QHK4	219 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	GFRAL	Q6UXV0	394 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MICALCL	Q6ZW33	695 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CNGA4	Q8IV77	575 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	DCUN1D3	Q8IWE4	304 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	KLHDC8B	Q8IXV7	354 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	SLC22A15	Q8IZD6	547 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	LINC01555	Q8NAE3	123 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	OR2L8	Q8NGY9	312 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	OSBPL8	Q9BZF1	889 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ZNF304	Q9HCX3	659 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	FAM169A	Q9Y6X4	670 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CCDC168	Q8NDH2	2452 aa		13.57	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PKDREJ	Q9NTG1	2253 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	NSG1	A0A0A6YYJ2	146 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	TRGV8	A0A0C4DH27	118 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	TARM1	B6A8C7	271 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	SRPX2	O60687	465 aa	Predicted RBP	13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	COX6B1	P14854	86 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PTPN7	P35236	360 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	TNFSF10	P50591	281 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	TDGF1P3	P51864	188 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	VSX2	P58304	361 aa	Predicted RBP	13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	KLC1	Q07866	573 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	HSPA14	Q0VDF9	509 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PARP6	Q2NL67	630 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	KCTD11	Q693B1	232 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	TTC23L	Q6PF05	361 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	TMEM207	Q6UWW9	146 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	UNC5D	Q6UXZ4	953 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	RPTN	Q6XPR3	784 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	NDUFAF7	Q7L592	441 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	TAX1BP1	Q86VP1	789 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	VSTM4	Q8IW00	320 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms