RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 GOLGA6L6A8MZA4 724 aa16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 MASP2O00187 686 aa16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 PEX12O00623 359 aa16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 MCM3P25205 808 aa16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 EIF3BP55884 814 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 MYBPC3Q14896 1274 aa16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 KCTD19Q17RG1 926 aaPredicted RBP16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 TTLL10Q6ZVT0 673 aa16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 COX15Q7KZN9 410 aa16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 LRRC6Q86X45 466 aa16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 GALNT16Q8N428 558 aa16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 DENND1AQ8TEH3 1009 aa16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 PTERQ96BW5 349 aa16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 MRM3Q9HC36 420 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 SLAMF7Q9NQ25 335 aa16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 INTS7Q9NVH2 962 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 SYBUQ9NX95 663 aa16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 SLC39A10Q9ULF5 831 aa16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 DRG1Q9Y295 367 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-205ENST00000548650 DOPEY1Q5JWR5 2465 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 DSCR3O14972 297 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 FKBP9O95302 570 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 C1orf105O95561 183 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 ONECUT2O95948 504 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 IGHEP01854 428 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 FGGP02679 453 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 TPSB2P20231 275 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 MGAT1P26572 445 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 PSMB5P28074 263 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 ARSFP54793 590 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 TPSAB1Q15661 275 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 TYSND1Q2T9J0 566 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 FIGLAQ6QHK4 219 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 C4orf22Q6V702 233 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 OTOAQ7RTW8 1153 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 HMGCLL1Q8TB92 370 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 LPGAT1Q92604 370 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 RAD51AP1Q96B01 352 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 MFSD3Q96ES6 412 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 BIRC8Q96P09 236 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 SPSB2Q99619 263 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 KIFC1Q9BW19 673 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 WDR54Q9H977 334 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 CUTCQ9NTM9 273 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 BFARQ9NZS9 450 aa16.68■□□□□ 0.26
CHMP1A-205ENST00000548650 UNC79Q9P2D8 2635 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 HEATR5BQ9P2D3 2071 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 FITM1A5D6W6 292 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 TCP11X1B4DZS4 312 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 AP3B1O00203 1094 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 KPNA5O15131 536 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 NRP2O60462 931 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 CTSVO60911 334 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 NDUFS3O75489 264 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 AGFG2O95081 481 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 VAPBO95292 243 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 ALPPP05187 535 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 RNF224P0DH78 156 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 GRIA3P42263 894 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 KCNJ1P48048 391 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 NPY2RP49146 381 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 SOX8P57073 446 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 GBX1Q14549 363 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 SF1Q15637 639 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 CYP2A13Q16696 494 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 ZC3H12BQ5HYM0 836 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 FHL5Q5TD97 284 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 YOD1Q5VVQ6 348 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 CNSTQ6PJW8 725 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 CES3Q6UWW8 571 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 IGFL3Q6UXB1 125 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 ZNF662Q6ZS27 426 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 OTUD6BQ8N6M0 293 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 GSDMBQ8TAX9 411 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 SKA2Q8WVK7 121 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 SELENOSQ9BQE4 189 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 SLC26A1Q9H2B4 701 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 ZNF552Q9H707 407 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 LZTFL1Q9NQ48 299 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 CTSFQ9UBX1 484 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 TTC7AQ9ULT0 858 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 SOX13Q9UN79 622 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 KLK4Q9Y5K2 254 aa16.67■□□□□ 0.26
CHMP1A-205ENST00000548650 A0A1W2PPV9 198 aa16.66■□□□□ 0.26
CHMP1A-205ENST00000548650 TCRBV7S3A2A0A539 114 aa16.66■□□□□ 0.26
CHMP1A-205ENST00000548650 GOLGA8KD6RF30 607 aa16.66■□□□□ 0.26
CHMP1A-205ENST00000548650 GOLGA8TH3BQL2 631 aa16.66■□□□□ 0.26
CHMP1A-205ENST00000548650 AGPSO00116 658 aa16.66■□□□□ 0.26
CHMP1A-205ENST00000548650 NIPSNAP2O75323 286 aa16.66■□□□□ 0.26
CHMP1A-205ENST00000548650 SEMA7AO75326 666 aa16.66■□□□□ 0.26
CHMP1A-205ENST00000548650 ALBP02768 609 aa16.66■□□□□ 0.26
CHMP1A-205ENST00000548650 ALAS2P22557 587 aa16.66■□□□□ 0.26
CHMP1A-205ENST00000548650 MMP11P24347 488 aa16.66■□□□□ 0.26
CHMP1A-205ENST00000548650 ATP5DP30049 168 aa16.66■□□□□ 0.26
CHMP1A-205ENST00000548650 MRPL49Q13405 166 aaKnown RBP16.66■□□□□ 0.26
CHMP1A-205ENST00000548650 GRM7Q14831 915 aa16.66■□□□□ 0.26
CHMP1A-205ENST00000548650 NKG7Q16617 165 aa16.66■□□□□ 0.26
CHMP1A-205ENST00000548650 TCTE1Q5JU00 501 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms