RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 PROKR1Q8TCW9 393 aa9.28□□□□□ -0.92
CALCOCO1-210ENST00000548263 NUDT8Q8WV74 236 aa9.28□□□□□ -0.92
CALCOCO1-210ENST00000548263 ATOH8Q96SQ7 321 aa9.28□□□□□ -0.92
CALCOCO1-210ENST00000548263 TUBB1Q9H4B7 451 aa9.28□□□□□ -0.92
CALCOCO1-210ENST00000548263 TMEM30AQ9NV96 361 aa9.28□□□□□ -0.92
CALCOCO1-210ENST00000548263 TMEM248Q9NWD8 314 aa9.28□□□□□ -0.92
CALCOCO1-210ENST00000548263 KLHL20Q9Y2M5 609 aa9.28□□□□□ -0.92
CALCOCO1-210ENST00000548263 TMED5Q9Y3A6 229 aa9.28□□□□□ -0.92
CALCOCO1-210ENST00000548263 ACTL7AQ9Y615 435 aa9.28□□□□□ -0.92
CALCOCO1-210ENST00000548263 FOCADQ5VW36 1801 aa9.28□□□□□ -0.92
CALCOCO1-210ENST00000548263 ANKRD66B4E2M5 251 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 LZTS3O60299 673 aaPredicted RBP9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 TBL1XO60907 577 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 CLDN11O75508 207 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 TRBC1P01850 177 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 DNAJA1P31689 397 aaKnown RBP9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 IFNA8P32881 189 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 DCTP40126 519 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 CDH12P55289 794 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 DGKKQ5KSL6 1271 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 LETMD1Q6P1Q0 360 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 EIF3MQ7L2H7 374 aaKnown RBP9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 SLC34A3Q8N130 599 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 TMEM151AQ8N4L1 468 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 CHDHQ8NE62 594 aaPredicted RBP9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 WDR36Q8NI36 951 aaKnown RBP9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 ITPKCQ96DU7 683 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 UROC1Q96N76 676 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 ZNF641Q96N77 438 aaPredicted RBP9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 SMIM14Q96QK8 99 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 COPS8Q99627 209 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 SMAD5Q99717 465 aaKnown RBP9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 POPDC3Q9HBV1 291 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 CLN6Q9NWW5 311 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 SARDHQ9UL12 918 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 CORINQ9Y5Q5 1042 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 A8MU76 341 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 EPOP01588 193 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 ALPLP05186 524 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 RPLP0P05388 317 aaKnown RBP9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 ALPIP09923 528 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 DGKEP52429 567 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 NFKB2Q00653 900 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 MXD1Q05195 221 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 FPGSQ05932 587 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 CLCA4Q14CN2 919 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 NCF4Q15080 339 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 C11orf96Q7Z7L8 435 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 OR8J3Q8NGG0 315 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 SGCDQ92629 289 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 GTPBP3Q969Y2 492 aaKnown RBP9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 TTPALQ9BTX7 342 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 LTB4R2Q9NPC1 389 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 RAB23Q9ULC3 237 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 HPRP00739 348 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 ENGP17813 658 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 HTR1BP28222 390 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 ALDH9A1P49189 494 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 OLR1P78380 273 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 SMAD3P84022 425 aaKnown RBP9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 ABRQ12979 859 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 CDK5R2Q13319 367 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 LRRC73Q5JTD7 316 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 RGL4Q8IZJ4 473 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 UHRF1Q96T88 793 aaPredicted RBP9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 MTERF1Q99551 399 aaKnown RBP9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 ARNT2Q9HBZ2 717 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 MIEF1Q9NQG6 463 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 NLE1Q9NVX2 485 aaPredicted RBP9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 FCF1Q9Y324 198 aaKnown RBP9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 PEX16Q9Y5Y5 336 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 DOCK1Q14185 1865 aa9.27□□□□□ -0.93
CALCOCO1-210ENST00000548263 URB1O60287 2271 aaKnown RBP9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 F5P12259 2224 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 PRR23AA6NEV1 266 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 MAGEB17A8MXT2 336 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 UPK3BL1B0FP48 263 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 FAM220BPB1ANY3 271 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 UPK3BL2E5RIL1 263 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 FXYD1O00168 92 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 MYL12BO14950 172 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 PRAMEF11O60813 436 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 OXSR1O95747 527 aaPredicted RBP9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 LRG1P02750 347 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 OPN1SWP03999 348 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 PRPS2P11908 318 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 NNMTP40261 264 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 EMX1Q04741 257 aaPredicted RBP9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 HIST2H2ACQ16777 129 aaPredicted RBP9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 CPTPQ5TA50 214 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 TRIQKQ629K1 86 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 HIST2H2AA3Q6FI13 130 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 ALKAL1Q6UXT8 129 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 PLEKHG7Q6ZR37 379 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 CAMKK1Q8N5S9 505 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 POP5Q969H6 163 aaKnown RBP9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 ITPAQ9BY32 194 aa9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 RPRD1BQ9NQG5 326 aaKnown RBP9.26□□□□□ -0.93
CALCOCO1-210ENST00000548263 FNIP2Q9P278 1114 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms