RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 NAA25Q14CX7 972 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 PPP1R3AQ16821 1122 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 CDKL4Q5MAI5 379 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 DCAF12Q5T6F0 453 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 SBSNQ6UWP8 590 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 CEACAM20Q6UY09 585 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 SPNS2Q8IVW8 549 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 OR2A1Q8NGT9 310 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 OR8K5Q8NH50 307 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 SNIP1Q8TAD8 396 aaKnown RBP13.97□□□□□ -0.17
DDX54-203ENST00000546869 MDM1Q8TC05 714 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 USP7Q93009 1102 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 TCTN2Q96GX1 697 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 PDE7BQ9NP56 450 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 SLC39A1Q9NY26 324 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 TSR3Q9UJK0 312 aaKnown RBP13.97□□□□□ -0.17
DDX54-203ENST00000546869 PCDHB11Q9Y5F2 797 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 IKBKGQ9Y6K9 419 aa13.97□□□□□ -0.17
DDX54-203ENST00000546869 C9orf172C9J069 976 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 POLR1CO15160 346 aaPredicted RBP13.96□□□□□ -0.17
DDX54-203ENST00000546869 KRT38O76015 456 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 SLC35E2BP0CK96 405 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 CCDC166P0CW27 439 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 ST6GAL1P15907 406 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 IMPA1P29218 277 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 SLC5A2P31639 672 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 ARL4DP49703 201 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 MAPK10P53779 464 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 ZNF460Q14592 562 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 PHKG1Q16816 387 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 ERCC6LQ2NKX8 1250 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.96□□□□□ -0.17
DDX54-203ENST00000546869 LGSNQ5TDP6 509 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 MROH9Q5TGP6 573 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 EMBQ6PCB8 327 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 FOXR1Q6PIV2 292 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 ADGRD1Q6QNK2 874 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 TAOK1Q7L7X3 1001 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 ADAMTSL2Q86TH1 951 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 PROSER1Q86XN7 944 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 FAM129CQ86XR2 697 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 DCAKDQ8WVC6 231 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 ATL1Q8WXF7 558 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 PPM1MQ96MI6 270 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 CCDC77Q9BR77 488 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 SPRY4Q9C004 299 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 PPCSQ9HAB8 311 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 ENAMQ9NRM1 1142 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 INTS7Q9NVH2 962 aaKnown RBP13.96□□□□□ -0.17
DDX54-203ENST00000546869 CTNNAL1Q9UBT7 734 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 CIDEBQ9UHD4 219 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 ACOT9Q9Y305 439 aa13.96□□□□□ -0.17
DDX54-203ENST00000546869 AKAP13Q12802 2813 aa13.96□□□□□ -0.18
DDX54-203ENST00000546869 A0A087X1B8 175 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 EXOC1LA0A1B0GW35 172 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 PHGDHO43175 533 aaKnown RBP13.95□□□□□ -0.18
DDX54-203ENST00000546869 FOLR1P15328 257 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 CD1DP15813 335 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 CCND1P24385 295 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 MAGEA12P43365 314 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 SH3BP2P78314 561 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 ABATP80404 500 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 RELAQ04206 551 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 PRDX1Q06830 199 aaKnown RBP13.95□□□□□ -0.18
DDX54-203ENST00000546869 FASTKQ14296 549 aaKnown RBP13.95□□□□□ -0.18
DDX54-203ENST00000546869 SF1Q15637 639 aaKnown RBP13.95□□□□□ -0.18
DDX54-203ENST00000546869 FBXO38Q6PIJ6 1188 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 TIFABQ6ZNK6 161 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 GSPT2Q8IYD1 628 aaKnown RBP13.95□□□□□ -0.18
DDX54-203ENST00000546869 C19orf47Q8N9M1 422 aaKnown RBP13.95□□□□□ -0.18
DDX54-203ENST00000546869 OR2L3Q8NG85 312 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 FBXL8Q96CD0 374 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 PCBD2Q9H0N5 130 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 NMRAL1Q9HBL8 299 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 STOX2Q9P2F5 926 aaPredicted RBP13.95□□□□□ -0.18
DDX54-203ENST00000546869 ANKMY1Q9P2S6 941 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 IKZF3Q9UKT9 509 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 RAB21Q9UL25 225 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 OARD1Q9Y530 152 aa13.95□□□□□ -0.18
DDX54-203ENST00000546869 KRT87PA6NCN2 255 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 PABPN1LA6NDY0 278 aaKnown RBP13.94□□□□□ -0.18
DDX54-203ENST00000546869 POC1B-GALNT4F8VUJ3 575 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 TAF4O00268 1085 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 CDC7O00311 574 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 PRAMEF10O60809 474 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 KRT37O76014 449 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 SYF2O95926 243 aaKnown RBP13.94□□□□□ -0.18
DDX54-203ENST00000546869 ALDOAP04075 364 aaKnown RBP13.94□□□□□ -0.18
DDX54-203ENST00000546869 C2P06681 752 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 SNRPAP09012 282 aaKnown RBP13.94□□□□□ -0.18
DDX54-203ENST00000546869 HRH2P25021 359 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 GCAP28676 217 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 TYK2P29597 1187 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 GRIA3P42263 894 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 GABRA4P48169 554 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 HNMTP50135 292 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 SERPINB8P50452 374 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 PCBP4P57723 403 aaKnown RBP13.94□□□□□ -0.18
DDX54-203ENST00000546869 RASA2Q15283 850 aa13.94□□□□□ -0.18
DDX54-203ENST00000546869 ZIC1Q15915 447 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms