RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ABT1Q9ULW3 272 aaKnown RBP3.54□□□□□ -1.84
SCFD1-207ENST00000544052 PCDHA7Q9UN72 937 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 ITGB4P16144 1822 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 OVOS2A0A0J9YW53 1432 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 OVOS2Q6IE36 1432 aa3.54□□□□□ -1.84
SCFD1-207ENST00000544052 PCSK5Q92824 1860 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 UTRNP46939 3433 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 IGLV5-37A0A075B6J1 123 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 HYKKA2RU49 373 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 CLEC18AA5D8T8 446 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 GPR137BO60478 399 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 CDC25CP30307 473 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 MMP15P51511 669 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 PTENP60484 403 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 RRS1Q15050 365 aaKnown RBP3.53□□□□□ -1.84
SCFD1-207ENST00000544052 SF3B4Q15427 424 aaKnown RBP eCLIP3.53□□□□□ -1.842e-7■■■□□ 18
SCFD1-207ENST00000544052 CCDC142Q17RM4 750 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 ZNF674Q2M3X9 581 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 STXBP5Q5T5C0 1151 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 PLXDC2Q6UX71 529 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 ZNF704Q6ZNC4 412 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-207ENST00000544052 NUP54Q7Z3B4 507 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 ARHGAP22Q7Z5H3 698 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 CARNMT1Q8N4J0 409 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 ZNF441Q8N8Z8 693 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 CLEC18CQ8NCF0 446 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 MOSPD2Q8NHP6 518 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 GRAPLQ8TC17 118 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-207ENST00000544052 TMEM255BQ8WV15 326 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 MMADHCQ9H3L0 296 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-207ENST00000544052 GAREM1Q9H706 876 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 RNF7Q9UBF6 113 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 MALT1Q9UDY8 824 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 RALYQ9UKM9 306 aaKnown RBP3.53□□□□□ -1.84
SCFD1-207ENST00000544052 PCDHAC2Q9Y5I4 1007 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 TTC21BQ7Z4L5 1316 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 MAP2P11137 1827 aaKnown RBP3.53□□□□□ -1.84
SCFD1-207ENST00000544052 PSMD14O00487 310 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 CLDN4O14493 209 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 FMO6PO60774 539 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 SIX3O95343 332 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-207ENST00000544052 LDLRP01130 860 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 GM2AP17900 193 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 FBLP22087 321 aaKnown RBP3.53□□□□□ -1.84
SCFD1-207ENST00000544052 TCEA1P23193 301 aaKnown RBP3.53□□□□□ -1.84
SCFD1-207ENST00000544052 KRT2P35908 639 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 TCF7P36402 384 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-207ENST00000544052 ARCN1P48444 511 aaKnown RBP3.53□□□□□ -1.84
SCFD1-207ENST00000544052 LHX1P48742 406 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 SLC9A3P48764 834 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 PEX5P50542 639 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 GTF2H2Q13888 395 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 ZNF260Q3ZCT1 412 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 NDUFAF5Q5TEU4 345 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 FAM91A1Q658Y4 838 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 GTF2H2CQ6P1K8 395 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 FAM122CQ6P4D5 195 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 FAM171BQ6P995 826 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 FAM43BQ6ZT52 329 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-207ENST00000544052 C11orf57Q6ZUT1 292 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-207ENST00000544052 ABI3BPQ7Z7G0 1075 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 FBXL14Q8N1E6 418 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-207ENST00000544052 HEXDCQ8WVB3 486 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 ATL1Q8WXF7 558 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 NSMAFQ92636 917 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 NEUROG1Q92886 237 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 HES6Q96HZ4 224 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 EGFL8Q99944 293 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 SLX1AQ9BQ83 275 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 ACKR4Q9NPB9 350 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 TBC1D7Q9P0N9 293 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 SEPT10Q9P0V9 454 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 GRIP1Q9Y3R0 1128 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 SNX5Q9Y5X3 404 aa3.53□□□□□ -1.84
SCFD1-207ENST00000544052 CHD4Q14839 1912 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 VIRMAQ69YN4 1812 aaKnown RBP3.52□□□□□ -1.85
SCFD1-207ENST00000544052 OVOS2A0A0G2JMS6 1433 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 A0A1W2PP64 1363 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 BRD4O60885 1362 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-207ENST00000544052 ROCK2O75116 1388 aaKnown RBP3.52□□□□□ -1.85
SCFD1-207ENST00000544052 ANKRD66B4E2M5 251 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 GOSR1O95249 250 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 LBPP18428 481 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 ASCL1P50553 236 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 TUBA1BP68363 451 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 MEP1BQ16820 701 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 MDH1BQ5I0G3 518 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 TCTE1Q5JU00 501 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 TRNP1Q6NT89 227 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 IYDQ6PHW0 289 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 MOXD1Q6UVY6 613 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 TMEM182Q6ZP80 229 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-207ENST00000544052 C1QL2Q7Z5L3 287 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 DSG4Q86SJ6 1040 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 KLHL7Q8IXQ5 586 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 TMCO5AQ8N6Q1 288 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 NAT8LQ8N9F0 302 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 NHLRC2Q8NBF2 726 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 B4GALNT2Q8NHY0 566 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms