RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.71□□□□□ -1.02
VPS13D-212ENST00000543766 RNF103-CHMP3A0A140T963 221 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 C2CD2LO14523 706 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 ADRB3P13945 408 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 MSH3P20585 1137 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 IGFBP5P24593 272 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 PTX3P26022 381 aaPredicted RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 ALDH9A1P49189 494 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 ARL4CP56559 192 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 SNRPD2P62316 118 aaKnown RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 MFSD13AQ14CX5 517 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 TRIP10Q15642 601 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 TCHHL1Q5QJ38 904 aaPredicted RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 ATAD3CQ5T2N8 411 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 SLC24A5Q71RS6 500 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 OR5T3Q8NGG3 340 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 OR6Y1Q8NGX8 325 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 OR8K5Q8NH50 307 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 PIWIL2Q8TC59 973 aaKnown RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 BLOC1S5Q8TDH9 187 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 WNT8BQ93098 351 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 ALX4Q9H161 411 aaPredicted RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 FBXO44Q9H4M3 255 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 C11orf49Q9H6J7 331 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 RIC8BQ9NVN3 520 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 LGALS13Q9UHV8 139 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 ZFR2Q9UPR6 939 aaKnown RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 PSME4Q14997 1843 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 ERI2A8K979 691 aaKnown RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 POTECB2RU33 542 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 E5RI56 91 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 GSC2O15499 205 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 KDM4BO94953 1096 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 ZNF7P17097 686 aaPredicted RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 NPR2P20594 1047 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 RAC3P60763 192 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 SCN1BQ07699 218 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 AGAP7PQ5VUJ5 663 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 UGT2A3Q6UWM9 527 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 IL20RBQ6UXL0 311 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 LINGO2Q7L985 606 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 COMMD7Q86VX2 200 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 PTRH1Q86Y79 214 aaKnown RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 NUDT10Q8NFP7 164 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 OR2L8Q8NGY9 312 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 CCDC107Q8WV48 283 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 BTN2A2Q8WVV5 523 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 GJD4Q96KN9 370 aaPredicted RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 MRPS26Q9BYN8 205 aaKnown RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 POTEKPQ9BYX7 375 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 LATS2Q9NRM7 1088 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 GSKIPQ9P0R6 139 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 PFASO15067 1338 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 TP53BP1Q12888 1972 aaPredicted RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 FBLL1A6NHQ2 334 aaKnown RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 LOC110117498-PIK3R3F6TDL0 507 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 SULT1C2O00338 296 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 ZNF213O14771 459 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 PSMA7O14818 248 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 PGRMC2O15173 223 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 HS6ST1O60243 411 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 SCGB2A1O75556 95 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 PCCBP05166 539 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 CNPP09543 421 aaKnown RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 ZNF26P17031 533 aaPredicted RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 TGM4P49221 684 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 ATP6V0D1P61421 351 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 MGAT5BQ3V5L5 792 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 OTUD1Q5VV17 481 aaPredicted RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 RPL13AP3Q6NVV1 102 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 PRMT9Q6P2P2 845 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 TMEM65Q6PI78 240 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 TRABD2AQ86V40 505 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 C12orf40Q86WS4 652 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 ARHGAP12Q8IWW6 846 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 LRRC18Q8N456 261 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 OR10T2Q8NGX3 314 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 LIPHQ8WWY8 451 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 PHYHIPQ92561 330 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 PTPN18Q99952 460 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 SPXQ9BT56 116 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 ASB7Q9H672 318 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 CCM2LQ9NUG4 571 aaPredicted RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 TMEM39AQ9NV64 488 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 GCNT4Q9P109 453 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 ARMCX3Q9UH62 379 aaPredicted RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 SEPT9Q9UHD8 586 aaPredicted RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 DBR1Q9UK59 544 aaKnown RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 TSPAN16Q9UKR8 245 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 C14orf166Q9Y224 244 aaKnown RBP8.7□□□□□ -1.02
VPS13D-212ENST00000543766 WIF1Q9Y5W5 379 aa8.7□□□□□ -1.02
VPS13D-212ENST00000543766 MYH11P35749 1972 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 SULT1C4O75897 302 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 MPOP05164 745 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 PRPS1L1P21108 318 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 IRS1P35568 1242 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 TGFBR2P37173 567 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 CLCNKAP51800 687 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 FOXO4P98177 505 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 UBAP2LQ14157 1087 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms