RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 PRAMEF13Q5VWM6 474 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 METTL2BQ6P1Q9 378 aaKnown RBP11.52□□□□□ -0.57
DDB1-223ENST00000543658 EFL1Q7Z2Z2 1120 aaKnown RBP11.52□□□□□ -0.57
DDB1-223ENST00000543658 CCNYL1Q8N7R7 359 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 MDM1Q8TC05 714 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 UBTD2Q8WUN7 234 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 ZNF480Q8WV37 535 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 ATP6V1E2Q96A05 226 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 CCDC74AQ96AQ1 378 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 MIPEPQ99797 713 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 TMEM79Q9BSE2 394 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 HAUS8Q9BT25 410 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 MECRQ9BV79 373 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 TBC1D10AQ9BXI6 508 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 ERVK-6Q9BXR3 956 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 CD244Q9BZW8 370 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 PCBD2Q9H0N5 130 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 SLC32A1Q9H598 525 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 PRM3Q9NNZ6 103 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 OXSMQ9NWU1 459 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 PTBP2Q9UKA9 531 aaKnown RBP11.52□□□□□ -0.57
DDB1-223ENST00000543658 BTBD3Q9Y2F9 522 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 STK38LQ9Y2H1 464 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 PCDHB11Q9Y5F2 797 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 USP34Q70CQ2 3546 aa11.52□□□□□ -0.57
DDB1-223ENST00000543658 HEATR5BQ9P2D3 2071 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 RP1P56715 2156 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.51□□□□□ -0.57
DDB1-223ENST00000543658 EME2A4GXA9 379 aaPredicted RBP11.51□□□□□ -0.57
DDB1-223ENST00000543658 K7EPI3 171 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 CLGNO14967 610 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 KATNA1O75449 491 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 PROS1P07225 676 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 CHRM5P08912 532 aaPredicted RBP11.51□□□□□ -0.57
DDB1-223ENST00000543658 ERGP11308 486 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 CKMT1AP12532 417 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 EPB42P16452 691 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 CKMT2P17540 419 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 TYRP1P17643 537 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 POLR2CP19387 275 aaPredicted RBP11.51□□□□□ -0.57
DDB1-223ENST00000543658 IMPDH1P20839 514 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 DNAJB13P59910 316 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 GPLD1P80108 840 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 MPP2Q14168 576 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 GRB7Q14451 532 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 KIR2DS3Q14952 304 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 NAA25Q14CX7 972 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 PCBP2Q15366 365 aaKnown RBP eCLIP11.51□□□□□ -0.57
DDB1-223ENST00000543658 CHI3L2Q15782 390 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 RBBP7Q16576 425 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 PDK4Q16654 411 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 CYP2A13Q16696 494 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 PROX2Q3B8N5 592 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 PTCHD3Q3KNS1 767 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 ZNF678Q5SXM1 525 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 ATG16L1Q676U5 607 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 GUSBP11Q6P575 273 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 SUSD1Q6UWL2 747 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 ASCL5Q7RTU5 278 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 MTERF4Q7Z6M4 381 aaKnown RBP11.51□□□□□ -0.57
DDB1-223ENST00000543658 C2orf73Q8N5S3 287 aaPredicted RBP11.51□□□□□ -0.57
DDB1-223ENST00000543658 Q8N9G6 341 aaPredicted RBP11.51□□□□□ -0.57
DDB1-223ENST00000543658 OR56A3Q8NH54 315 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 IFI44Q8TCB0 444 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 LRRC8CQ8TDW0 803 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 DENND1AQ8TEH3 1009 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 PYCR2Q96C36 320 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 TMEM237Q96Q45 408 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 PHOX2BQ99453 314 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 CDC6Q99741 560 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 CAPS2Q9BXY5 557 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 RXFP3Q9NSD7 469 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 DNAJC11Q9NVH1 559 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 ENTPD2Q9Y5L3 495 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 KCNE2Q9Y6J6 123 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 UNC13CQ8NB66 2214 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 OTOGLQ3ZCN5 2332 aa11.51□□□□□ -0.57
DDB1-223ENST00000543658 OR5K3A6NET4 321 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 E7ENX8 843 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 SH3BP5O60239 455 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 GDF9O60383 454 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 GFRA3O60609 400 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 SIX3O95343 332 aaPredicted RBP11.5□□□□□ -0.57
DDB1-223ENST00000543658 SERPINE1P05121 402 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 RPS17P08708 135 aaKnown RBP11.5□□□□□ -0.57
DDB1-223ENST00000543658 DHRS4L1P0CG22 281 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 MYF5P13349 255 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 CD59P13987 128 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 CMPK1P30085 196 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 GGT5P36269 586 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 SERPINB5P36952 375 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 CAPZBP47756 277 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 SLC6A12P48065 614 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 AGTR2P50052 363 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 CCNG1P51959 295 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 NAGLUP54802 743 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 WDR4P57081 412 aaKnown RBP11.5□□□□□ -0.57
DDB1-223ENST00000543658 TAP2Q03519 686 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 CDC16Q13042 620 aa11.5□□□□□ -0.57
DDB1-223ENST00000543658 GTF2H2Q13888 395 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms