RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 FOXK2Q01167 660 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 TAP2Q03519 686 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 DLG1Q12959 904 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 RTP5Q14D33 572 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 RASA2Q15283 850 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 MBOAT1Q6ZNC8 495 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 LRRC56Q8IYG6 542 aaPredicted RBP16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 SYTL1Q8IYJ3 562 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 CENPLQ8N0S6 344 aaPredicted RBP16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 KCTD4Q8WVF5 259 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 KIAA1191Q96A73 305 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 SLC41A2Q96JW4 573 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 IGSF5Q9NSI5 407 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 ARL15Q9NXU5 204 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 OARD1Q9Y530 152 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 A0A0J9YY10 115 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 PMS2P1A4D2B8 440 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 SLC9B1P1A6NJY1 282 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 AGRPO00253 132 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 FKBP9O95302 570 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 ZBTB11O95625 1053 aaPredicted RBP16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 HGFP14210 728 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 GABREP78334 506 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 FAM83EQ2M2I3 478 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 AGTRAPQ6RW13 159 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 TRIM73Q86UV7 250 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 OR2A1Q8NGT9 310 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 ATL1Q8WXF7 558 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 PTERQ96BW5 349 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 FBXL8Q96CD0 374 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 NXNL1Q96CM4 212 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 NXPE2Q96DL1 559 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 PRR11Q96HE9 360 aaPredicted RBP16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 TRAPPC9Q96Q05 1148 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 VPS11Q9H270 941 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 OCIAD1Q9NX40 245 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 UTP6Q9NYH9 597 aaKnown RBP16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 EURLQ9NYK6 297 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 BTRCQ9Y297 605 aa16.51■□□□□ 0.23
RABGGTA-203ENST00000543002 CCDC189A1A4V9 331 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 EFCAB7A8K855 629 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 B4E171 279 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 RFPL1O75677 317 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 KLHL2O95198 593 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 GUCA1CO95843 209 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 JMJD7P0C870 316 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 FGF3P11487 239 aaPredicted RBP16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 CCL4P13236 92 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 PVRP15151 417 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 ST6GAL1P15907 406 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 TFEBP19484 476 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 ITIH1P19827 911 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 TSPAN7P41732 249 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 SLCO1A2P46721 670 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 ARL4DP49703 201 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 HSD11B2P80365 405 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 OR4D1Q15615 310 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 SF1Q15637 639 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 FOXR1Q6PIV2 292 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 IGF2-ASQ6U949 168 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 SUSD1Q6UWL2 747 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 FRA10AC1Q70Z53 315 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 ISCA2Q86U28 154 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 FAM129CQ86XR2 697 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 GPSM1Q86YR5 675 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 LSMEM2Q8N112 164 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 BMPERQ8N8U9 685 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 PPFIBP2Q8ND30 876 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 OR2W6PQ8NHA6 318 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 STAG3L4Q8TBR4 150 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 EPS8L3Q8TE67 593 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 MZB1Q8WU39 189 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 CABS1Q96KC9 395 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 SIDT1Q9NXL6 827 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 PISDQ9UG56 409 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 TBK1Q9UHD2 729 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 PCDHB11Q9Y5F2 797 aa16.5■□□□□ 0.23
RABGGTA-203ENST00000543002 CCDC151A5D8V7 595 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 SMIM23A6NLE4 172 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 CDH16O75309 829 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 ERLIN1O75477 346 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 DXOO77932 396 aaKnown RBP16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 ANXA5P08758 320 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 COL6A2P12110 1019 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 PSMB5P28074 263 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 RPA3P35244 121 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 ETV5P41161 510 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 MLLT3P42568 568 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 MC2RQ01718 297 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 IFFO1Q0D2I5 559 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 TSTA3Q13630 321 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 ACAP2Q15057 778 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 TGFBIQ15582 683 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 CDKL4Q5MAI5 379 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 FAM20CQ8IXL6 584 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 PLD6Q8N2A8 252 aaKnown RBP16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 D2HGDHQ8N465 521 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 OR2L3Q8NG85 312 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 GATA6Q92908 595 aa16.49■□□□□ 0.23
RABGGTA-203ENST00000543002 GPR78Q96P69 363 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms