RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 LOC100130705A0A1B0GUX0 176 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 SAP18O00422 153 aaKnown RBP13.3□□□□□ -0.28
BNIP3-202ENST00000540159 OPN1SWP03999 348 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 SDC1P18827 310 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 PREPP48147 710 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 AQP6Q13520 282 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 USP39Q53GS9 565 aaKnown RBP13.3□□□□□ -0.28
BNIP3-202ENST00000540159 C6orf141Q5SZD1 244 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 CERS6Q6ZMG9 384 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 LSRQ86X29 649 aaPredicted RBP13.3□□□□□ -0.28
BNIP3-202ENST00000540159 ZDHHC21Q8IVQ6 265 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 EID3Q8N140 333 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 FUNDC2Q9BWH2 189 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 EPS8L2Q9H6S3 715 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 DNAJB9Q9UBS3 223 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 BAG5Q9UL15 447 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 ERVK-11Q9UQG0 969 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 SH3BP1Q9Y3L3 701 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 PRUNE2Q8WUY3 3088 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 CCDC88CQ9P219 2028 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 ARNTLO00327 626 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 TULP3O75386 442 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 DCKP27707 260 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 HTR1BP28222 390 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 LAIR2Q6ISS4 152 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 DPY19L3Q6ZPD9 716 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 GAREM2Q75VX8 874 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 OSBPL10Q9BXB5 764 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 REXO4Q9GZR2 422 aaKnown RBP13.3□□□□□ -0.28
BNIP3-202ENST00000540159 CLMPQ9H6B4 373 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 ATP13A3Q9H7F0 1226 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 HMX1Q9NP08 348 aaPredicted RBP13.3□□□□□ -0.28
BNIP3-202ENST00000540159 ST14Q9Y5Y6 855 aa13.3□□□□□ -0.28
BNIP3-202ENST00000540159 PABPN1LA6NDY0 278 aaKnown RBP13.29□□□□□ -0.28
BNIP3-202ENST00000540159 ZNF821O75541 412 aaPredicted RBP13.29□□□□□ -0.28
BNIP3-202ENST00000540159 KRT6AP02538 564 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 KRT6BP04259 564 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 KRT6CP48668 564 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 PTSQ03393 145 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 CHIT1Q13231 466 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 NR1D2Q14995 579 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 INO80DQ53TQ3 878 aaPredicted RBP13.29□□□□□ -0.28
BNIP3-202ENST00000540159 RUNDC3AQ59EK9 446 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 CRTC3Q6UUV7 619 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 CYP4Z1Q86W10 505 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 C2orf73Q8N5S3 287 aaPredicted RBP13.29□□□□□ -0.28
BNIP3-202ENST00000540159 OR8J3Q8NGG0 315 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 OR13F1Q8NGS4 319 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 MUC13Q9H3R2 512 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 CWH43Q9H720 699 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 TUBA8Q9NY65 449 aaPredicted RBP13.29□□□□□ -0.28
BNIP3-202ENST00000540159 ERVK-18Q9QC07 812 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 FADS2O95864 444 aaKnown RBP13.29□□□□□ -0.28
BNIP3-202ENST00000540159 HIST1H2AGP0C0S8 130 aaPredicted RBP13.29□□□□□ -0.28
BNIP3-202ENST00000540159 HIST1H2ADP20671 130 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 SERPINA4P29622 427 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 TM4SF4P48230 202 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 CD300CQ08708 224 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 PLEKHG6Q3KR16 790 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 LAIR1Q6GTX8 287 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 PDE12Q6L8Q7 609 aaKnown RBP13.29□□□□□ -0.28
BNIP3-202ENST00000540159 CYP2U1Q7Z449 544 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 ARL10Q8N8L6 244 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 DCAF4L2Q8NA75 395 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 OR52J3Q8NH60 311 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 PLEKHA8Q96JA3 519 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 HIST1H2AHQ96KK5 128 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 HIST1H2AJQ99878 128 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 H2AFJQ9BTM1 129 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 TMEM121BQ9BXQ6 578 aaPredicted RBP13.29□□□□□ -0.28
BNIP3-202ENST00000540159 SERHLQ9NQF3 203 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 HCFC1R1Q9NWW0 138 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 ZNF639Q9UID6 485 aa13.29□□□□□ -0.28
BNIP3-202ENST00000540159 M0R129 80 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 AGRPO00253 132 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 PSMB9P28065 219 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 HLA-FP30511 346 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 RAD23AP54725 363 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 VBP1P61758 197 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 PPP2R2BQ00005 443 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 UTS2BQ765I0 119 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 SYT12Q8IV01 421 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 CYB5D2Q8WUJ1 264 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 ELMO1Q92556 727 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 TBC1D23Q9NUY8 699 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 B4GALT6Q9UBX8 382 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 BTBD3Q9Y2F9 522 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 SNX5Q9Y5X3 404 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 NEDD8-MDP1E9PL57 170 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 SLC28A1O00337 649 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 SLC1A7O00341 560 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 BCKDKO14874 412 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 ABCB7O75027 752 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 IGSF6O95976 241 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 IL6P05231 212 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 AP1S1P61966 158 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 VLDLRP98155 873 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 MAPK11Q15759 364 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 TMEM236Q5W0B7 351 aa13.28□□□□□ -0.28
BNIP3-202ENST00000540159 Q6ZVL8 140 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms