RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 FHL2Q14192 279 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 DMC1Q14565 340 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 ZNF234Q14588 700 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 PTPRRQ15256 657 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 TBCEQ15813 527 aaPredicted RBP2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 CDO1Q16878 200 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 C9orf152Q5JTZ5 239 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 KCNT1Q5JUK3 1230 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 FAM102AQ5T9C2 384 aaPredicted RBP2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 SFMBT2Q5VUG0 894 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 PLAG1Q6DJT9 500 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 ALKBH5Q6P6C2 394 aaKnown RBP2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 CRTC1Q6UUV9 634 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 LINGO4Q6UY18 593 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 RAD9BQ6WBX8 426 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 IGSF10Q6WRI0 2623 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 KDM7AQ6ZMT4 941 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 LEKR1Q6ZMV7 388 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 DBX2Q6ZNG2 339 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 SYT13Q7L8C5 426 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 ARCQ7LC44 396 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 SZRD1Q7Z422 152 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 TFAP2DQ7Z6R9 452 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 PXKQ7Z7A4 578 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 ZNF677Q86XU0 584 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 CCDC28AQ8IWP9 274 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 ARHGAP12Q8IWW6 846 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 RHOT2Q8IXI1 618 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 LGI2Q8N0V4 545 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 SPARTQ8N0X7 666 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 ARHGAP18Q8N392 663 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 DEFB119Q8N690 84 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 NPWQ8N729 165 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 TERB1Q8NA31 727 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 PDPRQ8NCN5 879 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 TMEM35BQ8NCS4 154 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 FIBINQ8TAL6 211 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 METTL6Q8TCB7 284 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 DDI1Q8WTU0 396 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 RNF139Q8WU17 664 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 FAM172AQ8WUF8 416 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 RAPGEF5Q92565 580 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 SYN2Q92777 582 aaPredicted RBP2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 ATOH1Q92858 354 aaPredicted RBP2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 ARHGEF2Q92974 986 aaKnown RBP2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 EXOC4Q96A65 974 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 CENPTQ96BT3 561 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 OTUB2Q96DC9 234 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 C1orf74Q96LT6 269 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 CCDC114Q96M63 670 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 C5orf34Q96MH7 638 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 KLHL32Q96NJ5 620 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 MCEEQ96PE7 176 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 FAM118BQ9BPY3 351 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 FERMT1Q9BQL6 677 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 FEM1AQ9BSK4 669 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 MRPL1Q9BYD6 325 aaKnown RBP2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 NACA2Q9H009 215 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 NAT10Q9H0A0 1025 aaKnown RBP2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 TKTL2Q9H0I9 626 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 THAP2Q9H0W7 228 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 ABCG4Q9H172 646 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 MUC13Q9H3R2 512 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 GOLPH3Q9H4A6 298 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 PRDM13Q9H4Q3 707 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 SYNPO2LQ9H987 977 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 PRSS16Q9NQE7 514 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 G6PC2Q9NQR9 355 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 FSCN3Q9NQT6 498 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 TMEM74BQ9NUR3 256 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 DNAJC17Q9NVM6 304 aaKnown RBP2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 ASNSD1Q9NWL6 643 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 JKAMPQ9P055 326 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 HCN3Q9P1Z3 774 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 DEC1Q9P2X7 70 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 PCSK1NQ9UHG2 260 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 SH3BGRL2Q9UJC5 107 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 FZD10Q9ULW2 581 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 MMP17Q9ULZ9 603 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 MYO6Q9UM54 1294 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 USP22Q9UPT9 525 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 SHOC2Q9UQ13 582 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 MYRFQ9Y2G1 1151 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 TBC1D30Q9Y2I9 924 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 KLHL20Q9Y2M5 609 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 CHST2Q9Y4C5 530 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 HYOU1Q9Y4L1 999 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 CCL27Q9Y4X3 112 aa2.55□□□□□ -2
TNFRSF1A-210ENST00000537842 CACNA1BQ00975 2339 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 FANCMQ8IYD8 2048 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 NUP210Q8TEM1 1887 aaPredicted RBP2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 TRGV11A0A075B6L2 103 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 IGHV1OR15-9A0A0B4J2B8 117 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 A0A0U1RQS6 177 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 CENPVL1A0A0U1RR11 272 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 C1QTNF3-AMACRE9PGA6 284 aa2.54□□□□□ -2
TNFRSF1A-210ENST00000537842 J3KR12 359 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms