RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 HLA-DQA1Q5Y7H0 255 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 NCEH1Q6PIU2 408 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ADGRG2Q8IZP9 1017 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 HEXDCQ8WVB3 486 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 OR52B2Q96RD2 323 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 TCEAL7Q9BRU2 100 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 FAIM2Q9BWQ8 316 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ATP13A3Q9H7F0 1226 aa5.56□□□□□ -1.52
CSMD1-215ENST00000537824 ZCCHC11Q5TAX3 1644 aaKnown RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 CAPN15O75808 1086 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 PLA2G16P53816 162 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 ACOX1Q15067 660 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 LIPKQ5VXJ0 399 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 ST8SIA2Q92186 375 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 DDX1Q92499 740 aaKnown RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 NR4A3Q92570 626 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 NKD2Q969F2 451 aaPredicted RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 ZCCHC2Q9C0B9 1178 aaKnown RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF395Q9H8N7 513 aaPredicted RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 F8W036 122 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 SUPT20HL2P0C7V6 817 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 OR1E1P30953 314 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 BLOC1S1P78537 153 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 MPP7Q5T2T1 576 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 OTOP3Q7RTS5 596 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 OOSP2Q86WS3 158 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 PRDM12Q9H4Q4 367 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 MYPNQ86TC9 1320 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 H0YAE9 185 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 KRT33AO76009 404 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 CLCN3P51790 818 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 GALNT1Q10472 559 aaPredicted RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 BRINP3Q76B58 766 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF367Q7RTV3 350 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 OR10G2Q8NGC3 310 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 NDNFQ8TB73 568 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 CNTNAP3BQ96NU0 1288 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 COL21A1Q96P44 957 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 ABCD2Q9UBJ2 740 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 AGLP35573 1532 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 TLR4O00206 839 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 KMOO15229 486 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 FGF10O15520 208 aaPredicted RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 C6orf141Q5SZD1 244 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 BCL2L15Q5TBC7 163 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 LRRC70Q7Z2Q7 622 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 TRMT11Q7Z4G4 463 aaKnown RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 GPR180Q86V85 440 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 BIRC7Q96CA5 298 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 CDT1Q9H211 546 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 EQTNQ9NQ60 294 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 FAM234BA2RU67 622 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 QSOX1O00391 747 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 KIAA0513O60268 411 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 PRKCGP05129 697 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 MAPTP10636 758 aaKnown RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 ALDH3B1P43353 468 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 HMGCS2P54868 508 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 PON3Q15166 354 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 PYROXD2Q8N2H3 581 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 OR6K6Q8NGW6 343 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 TCF7L1Q9HCS4 588 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 NUFIP1Q9UHK0 495 aaKnown RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 DAGLAQ9Y4D2 1042 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 PCYT1BQ9Y5K3 369 aaPredicted RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 ALDH3B2P48448 385 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 TGM4P49221 684 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 RGS8P57771 180 aaPredicted RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 IFI44LQ53G44 452 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 BEND5Q7L4P6 421 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 HID1Q8IV36 788 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 CEP97Q8IW35 865 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 PSD2Q9BQI7 771 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF670Q9BS34 389 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 SONP18583 2426 aaKnown RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 DOCK4Q8N1I0 1966 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 H0YGN5 161 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 INPPL1O15357 1258 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 SEPT4O43236 478 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 RAB4AP20338 218 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 MYF6P23409 242 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 VLDLRP98155 873 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 NFIAQ12857 509 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 PPP1R8Q12972 351 aaKnown RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 PPP1R3AQ16821 1122 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 CLEC12AQ5QGZ9 265 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 TRAPPC5Q8IUR0 188 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 ARL11Q969Q4 196 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 SCRN2Q96FV2 425 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 MFSD14AQ96MC6 490 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 RCOR3Q9P2K3 495 aaPredicted RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF223Q9UK11 482 aaPredicted RBP5.55□□□□□ -1.52
CSMD1-215ENST00000537824 NFS1Q9Y697 457 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 LOC100130705A0A1B0GUX0 176 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 LACTBL1A8MY62 500 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 PCDH17O14917 1159 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 WNT3AP56704 352 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 CLCQ05315 142 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 ARMC12Q5T9G4 340 aa5.55□□□□□ -1.52
CSMD1-215ENST00000537824 RHBDF2Q6PJF5 856 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms