RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 GRIK4Q16099 956 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 CDKL4Q5MAI5 379 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 TDRD10Q5VZ19 366 aaKnown RBP8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 PYHIN1Q6K0P9 492 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 XRRA1Q6P2D8 792 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 BMP8AQ7Z5Y6 402 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 SIAH1Q8IUQ4 282 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 SPATA2LQ8IUW3 424 aaPredicted RBP8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 WDTC1Q8N5D0 677 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 C10orf90Q96M02 699 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 OMDQ99983 421 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 P2RY13Q9BPV8 354 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 ZNF251Q9BRH9 671 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 MARVELD1Q9BSK0 173 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 AMNQ9BXJ7 453 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 NUSAP1Q9BXS6 441 aaKnown RBP8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 OSBPL2Q9H1P3 480 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 AKTIPQ9H8T0 292 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 NMUR1Q9HB89 426 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 SDR39U1Q9NRG7 319 aaPredicted RBP8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 SMPD4Q9NXE4 827 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 MGAT4BQ9UQ53 548 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 CMAHPQ9Y471 501 aa8.34□□□□□ -1.08
SRGAP1-202ENST00000537556 FABP12A6NFH5 140 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 WTIPA6NIX2 430 aaPredicted RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 MT-CO1P00395 513 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 LALBAP00709 142 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 SLC35E2BP0CK96 405 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 SFTPCP11686 197 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 PRKACGP22612 351 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 GRK5P34947 590 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 CSRP3P50461 194 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 EIF6P56537 245 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 CLDN20P56880 219 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 OR4D2P58180 307 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 PSPHP78330 225 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 SMN1Q16637 294 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 GTDC1Q4AE62 458 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 PRSS36Q5K4E3 855 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 TSTD2Q5T7W7 516 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 DENND1BQ6P3S1 775 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 SHQ1Q6PI26 577 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 C17orf107Q6ZR85 190 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 FAM92BQ6ZTR7 304 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 CENPLQ8N0S6 344 aaPredicted RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 COLGALT1Q8NBJ5 622 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 LPCAT1Q8NF37 534 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 BTN2A2Q8WVV5 523 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 KIAA1143Q96AT1 154 aaPredicted RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 AKT1S1Q96B36 256 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 TMEM74Q96NL1 305 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 SLC4A9Q96Q91 983 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 RHNO1Q9BSD3 238 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 RHOJQ9H4E5 214 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 APOBEC3GQ9HC16 384 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 GSN-AS1Q9NRJ2 163 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 NYAP2Q9P242 653 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 PFDN2Q9UHV9 154 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 LOXHD1Q8IVV2 1947 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 A0A0A0MRY4 1105 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 EIF1BO60739 113 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 HCN1O60741 890 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 SEC22BO75396 215 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 PSAPP07602 524 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 TSPAN19P0C672 248 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 EIF1P41567 113 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 KCNQ1P51787 676 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 YBX1P67809 324 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 GBX1Q14549 363 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 VEPH1Q14D04 833 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 SOWAHCQ53LP3 525 aaPredicted RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 BHLHB9Q6PI77 547 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 UNC5DQ6UXZ4 953 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 TMEM135Q86UB9 458 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 UBE2J2Q8N2K1 259 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 DTWD1Q8N5C7 304 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 PCNPQ8WW12 178 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 PMM1Q92871 262 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 LPPQ93052 612 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 POP5Q969H6 163 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 CRELD1Q96HD1 420 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 SPATA13Q96N96 652 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 FCRL3Q96P31 734 aaPredicted RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 RBP7Q96R05 134 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 P2RX7Q99572 595 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 ZNF436Q9C0F3 470 aaPredicted RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 MS4A7Q9GZW8 240 aaPredicted RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 PIF1Q9H611 641 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 ESRP2Q9H6T0 727 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 BRD9Q9H8M2 597 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 GORASP2Q9H8Y8 452 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 ACTR8Q9H981 624 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 KRT84Q9NSB2 600 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 SPATA6Q9NWH7 488 aaPredicted RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 PIH1D1Q9NWS0 290 aaKnown RBP8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 PKP3Q9Y446 797 aa8.33□□□□□ -1.08
SRGAP1-202ENST00000537556 A0A0G2JPF8 293 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 HNRNPCL3B7ZW38 293 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 PCDH17O14917 1159 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 PLA2G10O15496 165 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms