RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 SPATA6Q9NWH7 488 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 GPRC5BQ9NZH0 403 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 KLQ9UEF7 1012 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 VPS9D1Q9Y2B5 631 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 PADI2Q9Y2J8 665 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 HTR3EA5X5Y0 456 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 ZNF840PA6NDX5 716 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 OR6C75A6NL08 312 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 SLC38A8A6NNN8 435 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 NPC1O15118 1278 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 XPNPEP2O43895 674 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 VPS26AO75436 327 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 RFPL2O75678 378 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 PGLSO95336 258 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 GJB5O95377 273 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 PCNAP12004 261 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 CD40LGP29965 261 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 GRK3P35626 688 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 LIPAP38571 399 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 SLC19A1P41440 591 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 MAP2K4P45985 399 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 RPS24P62847 133 aaKnown RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 NFATC2Q13469 925 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 NFE2Q16621 373 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 UGT8Q16880 541 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 PROX2Q3B8N5 592 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 RTP2Q5QGT7 225 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 OTUD3Q5T2D3 398 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 ZNF770Q6IQ21 691 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 SLC8B1Q6J4K2 584 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 IL27RAQ6UWB1 636 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 TAS1R1Q7RTX1 841 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 ADAMTSL2Q86TH1 951 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 TSPYL5Q86VY4 417 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 SNX29P2Q8IUI4 249 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 CCDC103Q8IW40 242 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 EID3Q8N140 333 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 FAM181AQ8N9Y4 354 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 ATAD1Q8NBU5 361 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 OR8J2Q8NGG1 315 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 GOT1L1Q8NHS2 421 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 TAMM41Q96BW9 452 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 EFHD2Q96C19 240 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 VWCEQ96DN2 955 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 EPYCQ99645 322 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 CTRCQ99895 268 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 HEPHQ9BQS7 1158 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 WDR12Q9GZL7 423 aaKnown RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 RNF38Q9H0F5 515 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 TM9SF3Q9HD45 589 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 TLR8Q9NR97 1041 aaKnown RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 C1orf109Q9NX04 203 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 ABI2Q9NYB9 513 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 PCDHB5Q9Y5E4 795 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 TMEM247A6NEH6 219 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 EIF3FO00303 357 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 SLC28A1O00337 649 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 NRG2O14511 850 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 PER2O15055 1255 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 COCHO43405 550 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 SERPINA1P01009 418 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 PDYNP01213 254 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 SPNP16150 400 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 AMD1P17707 334 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 ENDOUP21128 410 aaKnown RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 CDH3P22223 829 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 HOXD12P35452 270 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 OPRD1P41143 372 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 ABHD18Q0P651 414 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 SMN1Q16637 294 aaKnown RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 IMPG1Q17R60 797 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 NEK5Q6P3R8 708 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 CCDC80Q76M96 950 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 VN1R5Q7Z5H4 357 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 STK32CQ86UX6 486 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 HIPK1Q86Z02 1210 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 SOCS4Q8WXH5 440 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 ABTB1Q969K4 478 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 PLD4Q96BZ4 506 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 CDADC1Q9BWV3 514 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 ELAC1Q9H777 363 aaKnown RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 RMND5AQ9H871 391 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 PARVBQ9HBI1 364 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 UBA2Q9UBT2 640 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 AASSQ9UDR5 926 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 PSORS1C1Q9UIG5 152 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 FAF1Q9UNN5 650 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 LSM2Q9Y333 95 aaKnown RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 PCDHGC4Q9Y5F7 938 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 PCDHGA2Q9Y5H1 932 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 NCF1BA6NI72 391 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 NCF1CA8MVU1 366 aaPredicted RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 LOC730098B7Z3J9 87 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 ARVCFO00192 962 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 ADAM12O43184 909 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 SMAD6O43541 496 aaKnown RBP4.3□□□□□ -1.72
CTSC-208ENST00000533897 CLDN11O75508 207 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 CCNDBP1O95273 360 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 CTSHP09668 335 aa4.3□□□□□ -1.72
CTSC-208ENST00000533897 COL6A1P12109 1028 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms