RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 KIF1CO43896 1103 aaKnown RBP16.88■□□□□ 0.29
NXF1-216ENST00000533499 SMIM24O75264 130 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 MT-CO3P00414 261 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 CDK4P11802 303 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 JUPP14923 745 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 UGT2B7P16662 529 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 PSMB5P28074 263 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 ARL4DP49703 201 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 SEPHS1P49903 392 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 CFHR1Q03591 330 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 ARHGAP19Q14CB8 494 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 CYP2A13Q16696 494 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 TECRLQ5HYJ1 363 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 CACHD1Q5VU97 1274 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 TMEM71Q6P5X7 295 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 TMPRSS9Q7Z410 1059 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 FAM20CQ8IXL6 584 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 PYCR2Q96C36 320 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 FBXL8Q96CD0 374 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 PPM1MQ96MI6 270 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 MRPL57Q9BQC6 102 aaKnown RBP16.88■□□□□ 0.29
NXF1-216ENST00000533499 MENTQ9BUN1 341 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 MRPL46Q9H2W6 279 aaKnown RBP16.88■□□□□ 0.29
NXF1-216ENST00000533499 SEMA6CQ9H3T2 930 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 CCDC177Q9NQR7 707 aaPredicted RBP16.88■□□□□ 0.29
NXF1-216ENST00000533499 NUDT4Q9NZJ9 180 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 TAC3Q9UHF0 121 aa16.88■□□□□ 0.29
NXF1-216ENST00000533499 TK2O00142 265 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 MATN2O00339 956 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 NTN3O00634 580 aaPredicted RBP16.87■□□□□ 0.29
NXF1-216ENST00000533499 CSO75390 466 aaKnown RBP16.87■□□□□ 0.29
NXF1-216ENST00000533499 GSTA1P08263 222 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 OAS2P29728 719 aaKnown RBP16.87■□□□□ 0.29
NXF1-216ENST00000533499 PRDX3P30048 256 aaKnown RBP16.87■□□□□ 0.29
NXF1-216ENST00000533499 HOXD11P31277 338 aaPredicted RBP16.87■□□□□ 0.29
NXF1-216ENST00000533499 TBPL1P62380 186 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 KIR2DS3Q14952 304 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 PFKFB4Q16877 469 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 WDR74Q6RFH5 385 aaPredicted RBP16.87■□□□□ 0.29
NXF1-216ENST00000533499 FBXO39Q8N4B4 442 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 RCBTB1Q8NDN9 531 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 RHEBL1Q8TAI7 183 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 ESAMQ96AP7 390 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 APOPT1Q96IL0 206 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 CCDC74BQ96LY2 380 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 DEPDC7Q96QD5 511 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 ATOH8Q96SQ7 321 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 MAP3K3Q99759 626 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 MIPEPQ99797 713 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 DPYSL5Q9BPU6 564 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 C12orf65Q9H3J6 166 aaKnown RBP16.87■□□□□ 0.29
NXF1-216ENST00000533499 ACBD3Q9H3P7 528 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 KCNK9Q9NPC2 374 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 GRID1Q9ULK0 1009 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 CLCA2Q9UQC9 943 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 KLHL20Q9Y2M5 609 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 ENTPD2Q9Y5L3 495 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 DMXL1Q9Y485 3027 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 PCM1Q15154 2024 aa16.87■□□□□ 0.29
NXF1-216ENST00000533499 FAM149AA5PLN7 773 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 E7ENX8 843 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 PVRP15151 417 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 CREB1P16220 341 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 TAC1P20366 129 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 PEBP1P30086 187 aaKnown RBP16.86■□□□□ 0.29
NXF1-216ENST00000533499 CRHR1P34998 444 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 HSPA7P48741 367 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 INHBCP55103 352 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 CDKL1Q00532 357 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 TAP2Q03519 686 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 SLC18A2Q05940 514 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 FOXC1Q12948 553 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 SULT1C3Q6IMI6 304 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 CAPN13Q6MZZ7 669 aaPredicted RBP16.86■□□□□ 0.29
NXF1-216ENST00000533499 SPESP1Q6UW49 350 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 ZNF574Q6ZN55 896 aaPredicted RBP16.86■□□□□ 0.29
NXF1-216ENST00000533499 CDHR3Q6ZTQ4 885 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 B3GNT8Q7Z7M8 397 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 LCA5Q86VQ0 697 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 TCAIMQ8N3R3 496 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 CHCHD4Q8N4Q1 142 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 PTGR2Q8N8N7 351 aaPredicted RBP16.86■□□□□ 0.29
NXF1-216ENST00000533499 SNX31Q8N9S9 440 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 OR4D9Q8NGE8 314 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 SLC22A18Q96BI1 424 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 RHBDF1Q96CC6 855 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 PHF21BQ96EK2 531 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 PGM2Q96G03 612 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 TMEM74Q96NL1 305 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 VIPAS39Q9H9C1 493 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 TMBIM4Q9HC24 238 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 SOHLH2Q9NX45 425 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 SENP1Q9P0U3 644 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 POMT2Q9UKY4 750 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 PCDHB11Q9Y5F2 797 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 SPTBN4Q9H254 2564 aa16.86■□□□□ 0.29
NXF1-216ENST00000533499 SPTBN2O15020 2390 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 IGHV5-10-1A0A0J9YXX1 117 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 SLC9B1P1A6NJY1 282 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 CCNT2O60583 730 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms