RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 TOX3O15405 576 aaPredicted RBP20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 SPAG7O75391 227 aa20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 RPLP0P05388 317 aaKnown RBP20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 NCF1P14598 390 aaPredicted RBP20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 CPA3P15088 417 aa20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 TYRP1P17643 537 aa20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 HRH2P25021 359 aa20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 IMPA1P29218 277 aa20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 ABATP80404 500 aa20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 SPIDRQ14159 915 aa20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 PFKFB4Q16877 469 aa20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 ZNF761Q86XN6 746 aaPredicted RBP20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 ADGRF3Q8IZF5 1079 aa20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 TCP10LQ8TDR4 215 aa20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 GRAMD1AQ96CP6 724 aa20.43■□□□□ 0.86
PTP4A2-215ENST00000533408 EP300Q09472 2414 aaPredicted RBP20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 UBXN8O00124 270 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 STK16O75716 305 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 PROCP04070 461 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 POLR2CP19387 275 aaPredicted RBP20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 CMPK1P30085 196 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 GMPRP36959 345 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 KCNC1P48547 511 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 PRKAA2P54646 552 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 CCL7P80098 99 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 NFKB2Q00653 900 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 NAE1Q13564 534 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 SF1Q15637 639 aaKnown RBP20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 RSPO4Q2I0M5 234 aaPredicted RBP20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 C16orf46Q6P387 395 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 TMEM71Q6P5X7 295 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 CDHR3Q6ZTQ4 885 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 OR56A3Q8NH54 315 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 DENND1AQ8TEH3 1009 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 MED8Q96G25 268 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 CD244Q9BZW8 370 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 ACTR10Q9NZ32 417 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 ANGPTL3Q9Y5C1 460 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 KCNE2Q9Y6J6 123 aa20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 ARHGEF17Q96PE2 2063 aaPredicted RBP20.42■□□□□ 0.86
PTP4A2-215ENST00000533408 TARM1B6A8C7 271 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 TK2O00142 265 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 BTN3A3O00478 584 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 MTHFD2P13995 350 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 NOVA1P51513 510 aaKnown RBP20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 TSTA3Q13630 321 aaPredicted RBP20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 SETDB1Q15047 1291 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 SLC5A12Q1EHB4 618 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 PTCHD3Q3KNS1 767 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 IRGCQ6NXR0 463 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 LCTLQ6UWM7 567 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 ZYG11AQ6WRX3 759 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 LRRC70Q7Z2Q7 622 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 ALYREFQ86V81 257 aaKnown RBP20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 HOMEZQ8IX15 550 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 KLHDC8AQ8IYD2 350 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 TMEM151AQ8N4L1 468 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 OR4D9Q8NGE8 314 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 UBTD2Q8WUN7 234 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 ARL8AQ96BM9 186 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 TMEM74Q96NL1 305 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 IL17FQ96PD4 163 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 FAM111AQ96PZ2 611 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 SGPP1Q9BX95 441 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 ATG10Q9H0Y0 220 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 SYNDIG1Q9H7V2 258 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 OPTCQ9UBM4 332 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 CIDEBQ9UHD4 219 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 DYRK1BQ9Y463 629 aa20.41■□□□□ 0.86
PTP4A2-215ENST00000533408 NTN3O00634 580 aaPredicted RBP20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 CAPN5O15484 640 aaPredicted RBP20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 KATNA1O75449 491 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 TOP3BO95985 862 aaKnown RBP20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 PRDX3P30048 256 aaKnown RBP20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 SIM1P81133 766 aaPredicted RBP20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 TRA2AQ13595 282 aaKnown RBP eCLIP20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 PCBP2Q15366 365 aaKnown RBP eCLIP20.4■□□□□ 0.861e-7■■■■□ 24.4
PTP4A2-215ENST00000533408 HHATQ5VTY9 493 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 PRAMEF13Q5VWM6 474 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 SPESP1Q6UW49 350 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 USP53Q70EK8 1073 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 KMT5CQ86Y97 462 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 SPNS2Q8IVW8 549 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 PTGR2Q8N8N7 351 aaPredicted RBP20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 LMNTD1Q8N9Z9 388 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 LINC01555Q8NAE3 123 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 ARMC2Q8NEN0 867 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 JPH3Q8WXH2 748 aaPredicted RBP20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 RSC1A1Q92681 617 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 VPS13AQ96RL7 3174 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 TWSG1Q9GZX9 223 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 C1GALT1Q9NS00 363 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 DNAJC11Q9NVH1 559 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 GPRC5BQ9NZH0 403 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 AKAP7Q9P0M2 348 aaPredicted RBP20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 COPG2Q9UBF2 871 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 POMT2Q9UKY4 750 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 STK38LQ9Y2H1 464 aa20.4■□□□□ 0.86
PTP4A2-215ENST00000533408 MN1Q10571 1320 aaPredicted RBP20.39■□□□□ 0.85
PTP4A2-215ENST00000533408 TMEM120BA0PK00 339 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms