RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 PCDH12Q9NPG4 1184 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 TUBA8Q9NY65 449 aaPredicted RBP14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 GPRC5BQ9NZH0 403 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 CHD7Q9P2D1 2997 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 HEMK1Q9Y5R4 338 aaPredicted RBP14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 PLXNB3Q9ULL4 1909 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 GMNNO75496 209 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 CHIT1Q13231 466 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 SLC14A1Q13336 389 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 PON2Q15165 354 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 BRAT1Q6PJG6 821 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 LPCAT2Q7L5N7 544 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 ARHGAP22Q7Z5H3 698 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 CALHM3Q86XJ0 350 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 TCAIMQ8N3R3 496 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 OR10Q1Q8NGQ4 319 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 HIC2Q96JB3 615 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 APOLD1Q96LR9 279 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 ZSWIM3Q96MP5 696 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 CPPED1Q9BRF8 314 aaPredicted RBP14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 RIOK2Q9BVS4 552 aaKnown RBP14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 UGT2B28Q9BY64 529 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 KCNH6Q9H252 994 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 CIDEBQ9UHD4 219 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 ERVW-1Q9UQF0 538 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 MAN2B2Q9Y2E5 1009 aa14.92□□□□□ -0.02
CACNA1E-208ENST00000533229 B4GAT1O43505 415 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 ERN1O75460 977 aaKnown RBP14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 CST1P01037 141 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 TIMP2P16035 220 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 AMD1P17707 334 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 PFKLP17858 780 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 PRPH2P23942 346 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 WEE1P30291 646 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 VIPR1P32241 457 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 S100A3P33764 101 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 HALP42357 657 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 NTHL1P78549 312 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 DAG1Q14118 895 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 PGS1Q32NB8 556 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 FRG2Q64ET8 278 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 CYP2U1Q7Z449 544 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 RASGRP3Q8IV61 690 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 MICU2Q8IYU8 434 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 ALDH16A1Q8IZ83 802 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 MCOLN3Q8TDD5 553 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 FAM162AQ96A26 154 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 SLC47A1Q96FL8 570 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 FRG2BQ96QU4 278 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 SH3GL1Q99961 368 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 HEPHQ9BQS7 1158 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 NPLQ9BXD5 320 aaPredicted RBP14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 SMURF2Q9HAU4 748 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 DCAF13Q9NV06 445 aaKnown RBP14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 DNAJC11Q9NVH1 559 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 SAGE1Q9NXZ1 904 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 ERVK-11Q9UQG0 969 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 WNT6Q9Y6F9 365 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 DENND4CQ5VZ89 1909 aa14.91□□□□□ -0.02
CACNA1E-208ENST00000533229 CARNS1A5YM72 827 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 CREG1O75629 220 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 ALBP02768 609 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 RHOP08100 348 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 PRPS2P11908 318 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 MYCLP1P12525 358 aaPredicted RBP14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 ZNF30P17039 623 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 CYP2A7P20853 494 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 ELK4P28324 431 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 SHMT2P34897 504 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 NRIP1P48552 1158 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 SH3BGRP55822 239 aaPredicted RBP14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 SP140Q13342 867 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 CCSMST1Q4G0I0 132 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 HENMT1Q5T8I9 393 aaKnown RBP14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 PLPP4Q5VZY2 271 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 ATG9BQ674R7 924 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 ELMSAN1Q6PJG2 1045 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 GPR149Q86SP6 731 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 CLEC4FQ8N1N0 589 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 ZNF366Q8N895 744 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 CMTM7Q96FZ5 175 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 HHIPQ96QV1 700 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 EBPLQ9BY08 206 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 THEGQ9P2T0 379 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 EBF1Q9UH73 591 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 A0A096LPI6 279 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 ARHGEF33A8MVX0 844 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 G3V2T6 193 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 H0YAE9 185 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 SLC16A5O15375 505 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 NOBOXO60393 691 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 SLCO2B1O94956 709 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 SCELO95171 688 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 RECQLP46063 649 aaPredicted RBP14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 CTSCP53634 463 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 EPHA5P54756 1037 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 ABRQ12979 859 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 PMS2P3Q13401 168 aa14.9□□□□□ -0.02
CACNA1E-208ENST00000533229 SF1Q15637 639 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms