RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CCSMST1Q4G0I0 132 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 LETMD1Q6P1Q0 360 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 TTC23LQ6PF05 361 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 LRRC70Q7Z2Q7 622 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 TREML1Q86YW5 311 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 DDIASQ8IXT1 998 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 CDYL2Q8N8U2 506 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 OR4F6Q8NGB9 312 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 ACTRT2Q8TDY3 377 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 FBXL8Q96CD0 374 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 TIMM29Q9BSF4 260 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 TUBB6Q9BUF5 446 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 NUSAP1Q9BXS6 441 aaKnown RBP13.99□□□□□ -0.17
TTC39A-216ENST00000530004 ZDHHC5Q9C0B5 715 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 TMEM168Q9H0V1 697 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 OR52A5Q9H2C5 316 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 SLC32A1Q9H598 525 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 APOBEC3BQ9UH17 382 aaKnown RBP13.99□□□□□ -0.17
TTC39A-216ENST00000530004 BTRCQ9Y297 605 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 MYO15AQ9UKN7 3530 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 KATNA1O75449 491 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 WDR47O94967 919 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 CHEK2O96017 543 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 SYPP08247 313 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 ACP5P13686 325 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 EPB42P16452 691 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 ACADLP28330 430 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 SLC6A12P48065 614 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 HNRNPKP61978 463 aaKnown RBP eCLIP13.99□□□□□ -0.17
TTC39A-216ENST00000530004 ACTN3Q08043 901 aaPredicted RBP13.99□□□□□ -0.17
TTC39A-216ENST00000530004 TRAF3Q13114 568 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 LRP8Q14114 963 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 TBCCQ15814 346 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 ZNF423Q2M1K9 1284 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 PTCHD3Q3KNS1 767 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 TMEM198Q66K66 360 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 TCEAL6Q6IPX3 200 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 IL27RAQ6UWB1 636 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 EFL1Q7Z2Z2 1120 aaKnown RBP13.99□□□□□ -0.17
TTC39A-216ENST00000530004 SPDYE1Q8NFV5 336 aaPredicted RBP13.99□□□□□ -0.17
TTC39A-216ENST00000530004 CEP70Q8NHQ1 597 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 TCEAL3Q969E4 200 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 PYCR2Q96C36 320 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 NSL1Q96IY1 281 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 CCDC138Q96M89 665 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 ATG10Q9H0Y0 220 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 TUBB1Q9H4B7 451 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 CIDEBQ9UHD4 219 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 G3BP2Q9UN86 482 aaKnown RBP13.99□□□□□ -0.17
TTC39A-216ENST00000530004 PLEKHM1Q9Y4G2 1056 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 PTGDR2Q9Y5Y4 395 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 ST14Q9Y5Y6 855 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 MUC6Q6W4X9 2439 aa13.99□□□□□ -0.17
TTC39A-216ENST00000530004 KNL1Q8NG31 2342 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 ATP6AP2A0A1C7CYW4 349 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 KLHL33A6NCF5 533 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 ATP6AP2O75787 350 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 ENO1P06733 434 aaKnown RBP13.98□□□□□ -0.17
TTC39A-216ENST00000530004 CAPN1P07384 714 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 ZNF806P0C7X5 589 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 CTSEP14091 401 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 RXRGP48443 463 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 ARRB1P49407 418 aaPredicted RBP13.98□□□□□ -0.17
TTC39A-216ENST00000530004 CTBSQ01459 385 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 HLA-BQ31612 363 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 PRRT3Q5FWE3 981 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 METRNLQ641Q3 311 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 MILR1Q7Z6M3 343 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 PDZD3Q86UT5 571 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 SNX31Q8N9S9 440 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 FBXO15Q8NCQ5 510 aaPredicted RBP13.98□□□□□ -0.17
TTC39A-216ENST00000530004 CCL4L1Q8NHW4 92 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 ATL1Q8WXF7 558 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 PTCD3Q96EY7 689 aaKnown RBP13.98□□□□□ -0.17
TTC39A-216ENST00000530004 C3orf30Q96M34 536 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 CATSPER2Q96P56 530 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 PKP4Q99569 1192 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 LRRC61Q9BV99 259 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 GAREM1Q9H706 876 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 STOX2Q9P2F5 926 aaPredicted RBP13.98□□□□□ -0.17
TTC39A-216ENST00000530004 PSMD13Q9UNM6 376 aa13.98□□□□□ -0.17
TTC39A-216ENST00000530004 CACNA1EQ15878 2313 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 PRR19A6NJB7 356 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 PROB1E7EW31 1015 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 KCNJ13O60928 360 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 SLC16A8O95907 504 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 LINC00032P0C843 101 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 ESRRAP11474 423 aaPredicted RBP13.97□□□□□ -0.17
TTC39A-216ENST00000530004 ENGP17813 658 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 EPORP19235 508 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 CALB2P22676 271 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 AK4P27144 223 aaPredicted RBP13.97□□□□□ -0.17
TTC39A-216ENST00000530004 DMPKQ09013 629 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 ILF3Q12906 894 aaKnown RBP eCLIP13.97□□□□□ -0.17
TTC39A-216ENST00000530004 CDC16Q13042 620 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 C1orf61Q13536 156 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 SHBQ15464 509 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 TCHHL1Q5QJ38 904 aaPredicted RBP13.97□□□□□ -0.17
TTC39A-216ENST00000530004 AGTRAPQ6RW13 159 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 METTL6Q8TCB7 284 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms