RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 C1orf109Q9NX04 203 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 TAS2R13Q9NYV9 303 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 IL37Q9NZH6 218 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 SLAMF8Q9P0V8 285 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 MARCH4Q9P2E8 410 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 TBC1D14Q9P2M4 693 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 PSORS1C1Q9UIG5 152 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 SLCO3A1Q9UIG8 710 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 ZNF225Q9UK10 706 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 NUDT5Q9UKK9 219 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 USP22Q9UPT9 525 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 SAMD4AQ9UPU9 718 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 RNF6Q9Y252 685 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 MAN2B2Q9Y2E5 1009 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 RBMX2Q9Y388 322 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 PCDHGB6Q9Y5F9 930 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 KLK4Q9Y5K2 254 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 GMPPBQ9Y5P6 360 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 MAGED1Q9Y5V3 778 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 SNX10Q9Y5X0 201 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 LYVE1Q9Y5Y7 322 aa4.84□□□□□ -1.63
CTNNA1-241ENST00000524127 TRIOO75962 3097 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 SLC35F4A4IF30 521 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 LRRC14BA6NHZ5 514 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 PDZK1P1A8MUH7 402 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 A8MVJ9 347 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 M0R082 166 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 CLDN5O00501 218 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 DSCR3O14972 297 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 IRAK2O43187 625 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 SEC14L5O43304 696 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 RGS14O43566 566 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 NDUFB5O43674 189 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 WBP4O75554 376 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 RHOBTB1O94844 696 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 SLITRK5O94991 958 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 GOT2P00505 430 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 FTH1P02794 183 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 SEMG1P04279 462 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 YES1P07947 543 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 MMP2P08253 660 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 USP17L7P0C7H9 530 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 G6PDP11413 515 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 PCNAP12004 261 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 DARSP14868 501 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 ACPPP15309 386 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 SELPP16109 830 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 RHOQP17081 205 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 PRKCAP17252 672 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 HOXB9P17482 250 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 CD72P21854 359 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 PTX3P26022 381 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 PCSK1P29120 753 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 PKLRP30613 574 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 RRM2P31350 389 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 FMO3P31513 532 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 CCR1P32246 355 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 SOX6P35712 828 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 PBX3P40426 434 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 CASP2P42575 452 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 ALDH9A1P49189 494 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 CLCN4P51793 760 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 PCDH1Q08174 1060 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 DMPKQ09013 629 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 ABRQ12979 859 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 PPIGQ13427 754 aaKnown RBP eCLIP4.83□□□□□ -1.643e-8■■□□□ 12.5
CTNNA1-241ENST00000524127 IRF3Q14653 427 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 EIF4HQ15056 248 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 RBBP7Q16576 425 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 MAPKAPK3Q16644 382 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 SETMARQ53H47 684 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 YIF1BQ5BJH7 314 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 FAM26DQ5JW98 314 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 SIRPB2Q5JXA9 342 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 SPANXN2Q5MJ10 180 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 MARC1Q5VT66 337 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 LAIR1Q6GTX8 287 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 MSANTD2Q6P1R3 559 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 ERICH5Q6P6B1 374 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 C19orf48Q6RUI8 117 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 AFTPHQ6ULP2 937 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 TMC5Q6UXY8 1006 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.83□□□□□ -1.647e-6■□□□□ 11.2
CTNNA1-241ENST00000524127 GDPGP1Q6ZNW5 385 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 ZNF367Q7RTV3 350 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 C11orf74Q86VG3 221 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 CYP4Z1Q86W10 505 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 KRT73Q86Y46 540 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 RAB43Q86YS6 212 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 MSRB3Q8IXL7 192 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 RYBPQ8N488 228 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 C1orf52Q8N6N3 182 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 FAM86B1Q8N7N1 296 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 TTC29Q8NA56 475 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 LSM14AQ8ND56 463 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 ZNF540Q8NDQ6 660 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 DBF4BQ8NFT6 615 aa4.83□□□□□ -1.64
CTNNA1-241ENST00000524127 CNIH3Q8TBE1 160 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms