RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 RANBP17Q9H2T7 1088 aaKnown RBP4.28□□□□□ -1.72
SGCE-211ENST00000522045 HAUS4Q9H6D7 363 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 MAGEF1Q9HAY2 307 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 ATAD3AQ9NVI7 634 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 RMND1Q9NWS8 449 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 TMOD3Q9NYL9 352 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 UBA2Q9UBT2 640 aaPredicted RBP4.28□□□□□ -1.72
SGCE-211ENST00000522045 GJD2Q9UKL4 321 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 EXOGQ9Y2C4 368 aaKnown RBP4.28□□□□□ -1.72
SGCE-211ENST00000522045 KIAA1551Q9HCM1 1747 aa4.28□□□□□ -1.72
SGCE-211ENST00000522045 TNRC6CQ9HCJ0 1690 aaKnown RBP4.28□□□□□ -1.72
SGCE-211ENST00000522045 ROBO3Q96MS0 1386 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 ERICH2A1L162 156 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 EIF4E1BA6NMX2 242 aaKnown RBP4.27□□□□□ -1.73
SGCE-211ENST00000522045 C15orf62A8K5M9 175 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 MAGEB17A8MXT2 336 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 SLCO1B7G3V0H7 640 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 SLC22A2O15244 555 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 POLR3GO15318 223 aaPredicted RBP4.27□□□□□ -1.73
SGCE-211ENST00000522045 SHOX2O60902 331 aaPredicted RBP4.27□□□□□ -1.73
SGCE-211ENST00000522045 EML2O95834 649 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 LDHAP00338 332 aaKnown RBP4.27□□□□□ -1.73
SGCE-211ENST00000522045 LIPFP07098 398 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 FAM157CP0CG43 387 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 CALM1P0DP23 149 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 CALM2P0DP24 149 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 CALM3P0DP25 149 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 LIFP15018 202 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 CASP14P31944 242 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 PAFAH1B1P43034 410 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 TDO2P48775 406 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 LMAN1P49257 510 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 SLC8A3P57103 927 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 VSNL1P62760 191 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 CKAP4Q07065 602 aaKnown RBP4.27□□□□□ -1.73
SGCE-211ENST00000522045 CASP8Q14790 479 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 GRAMD1BQ3KR37 738 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 SPECC1Q5M775 1068 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 ZNF658Q5TYW1 1059 aaPredicted RBP4.27□□□□□ -1.73
SGCE-211ENST00000522045 ALS2CLQ60I27 953 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 CTR9Q6PD62 1173 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 LEKR1Q6ZMV7 388 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 BRINP3Q76B58 766 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 PAF1Q8N7H5 531 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 PDILTQ8N807 584 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 ANKRD20A12PQ8NF67 263 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 PSPC1Q8WXF1 523 aaKnown RBP4.27□□□□□ -1.73
SGCE-211ENST00000522045 ESR2Q92731 530 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 MAELQ96JY0 434 aaKnown RBP4.27□□□□□ -1.73
SGCE-211ENST00000522045 SMC6Q96SB8 1091 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 IWS1Q96ST2 819 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 RIOK1Q9BRS2 568 aaKnown RBP4.27□□□□□ -1.73
SGCE-211ENST00000522045 SYT11Q9BT88 431 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 THAP9Q9H5L6 903 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 TMEM181Q9P2C4 612 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 KLHL8Q9P2G9 620 aaPredicted RBP4.27□□□□□ -1.73
SGCE-211ENST00000522045 INTS6Q9UL03 887 aaKnown RBP4.27□□□□□ -1.73
SGCE-211ENST00000522045 MAU2Q9Y6X3 613 aa4.27□□□□□ -1.73
SGCE-211ENST00000522045 COL14A1Q05707 1796 aaKnown RBP4.27□□□□□ -1.73
SGCE-211ENST00000522045 ABCB11O95342 1321 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 ZNF831Q5JPB2 1677 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 ITGB4P16144 1822 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 PLOD2O00469 737 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 PRKAB2O43741 272 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 WISP2O76076 250 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 PLEKHA8P1O95397 391 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 MLYCDO95822 493 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 LONP1P36776 959 aaKnown RBP4.26□□□□□ -1.73
SGCE-211ENST00000522045 PPP1R2P41236 205 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 EIF3BP55884 814 aaKnown RBP4.26□□□□□ -1.73
SGCE-211ENST00000522045 AKAP17AQ02040 695 aaKnown RBP4.26□□□□□ -1.73
SGCE-211ENST00000522045 CDC16Q13042 620 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 TRPC3Q13507 836 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 BAK1Q16611 211 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 PRICKLE4Q2TBC4 344 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 GTDC1Q4AE62 458 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 PARP10Q53GL7 1025 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 TCP11X2Q5H9J9 407 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 KLHL10Q6JEL2 608 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 TOM1L2Q6ZVM7 507 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 NOA1Q8NC60 698 aaKnown RBP4.26□□□□□ -1.73
SGCE-211ENST00000522045 MRGPRDQ8TDS7 321 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 NELFBQ8WX92 580 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 PIGBQ92521 554 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 EPSTI1Q96J88 318 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 SLX1AQ9BQ83 275 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 RHNO1Q9BSD3 238 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 UBAC1Q9BSL1 405 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 CUEDC2Q9H467 287 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 MAGIXQ9H6Y5 334 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 LZTFL1Q9NQ48 299 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 CCDC177Q9NQR7 707 aaPredicted RBP4.26□□□□□ -1.73
SGCE-211ENST00000522045 SH3GLB2Q9NR46 395 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 TAB2Q9NYJ8 693 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 VPS54Q9P1Q0 977 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 HPCAL4Q9UM19 191 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 CAMK2AQ9UQM7 478 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 RRP15Q9Y3B9 282 aaKnown RBP4.26□□□□□ -1.73
SGCE-211ENST00000522045 COMMD10Q9Y6G5 202 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 C10orf71Q711Q0 1435 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms