RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ATP6V0BQ99437 205 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 TMEM204Q9BSN7 226 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 LRRC1Q9BTT6 524 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 PI4K2AQ9BTU6 479 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 ACAT2Q9BWD1 397 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 CACNG6Q9BXT2 260 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 PRRG4Q9BZD6 226 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 SLC5A7Q9GZV3 580 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 MIS12Q9H081 205 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 APOBEC3GQ9HC16 384 aaKnown RBP4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 KERAO60938 352 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 RPS6KA5O75582 802 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 BAG4O95429 457 aaKnown RBP4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 GSRP00390 522 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 LBPP18428 481 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 CD27P26842 260 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 PSMB4P28070 264 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 MNDAP41218 407 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 GSDMDP57764 484 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 PITX1P78337 314 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 KLC1Q07866 573 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 RPA4Q13156 261 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 SLC39A12Q504Y0 691 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 TATDN1Q6P1N9 297 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 TMEM270Q6UE05 265 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 KCTD9Q7L273 389 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 AMIGO1Q86WK6 493 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 NDUFAF2Q8N183 169 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 SNX21Q969T3 373 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 THOC1Q96FV9 657 aaKnown RBP4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 AK8Q96MA6 479 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 SLC2A11Q9BYW1 496 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 TM6SF1Q9BZW5 370 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 SNX25Q9H3E2 840 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 TMEM161AQ9NX61 479 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 WDR83OSQ9Y284 106 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 JRKLQ9Y4A0 524 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 TTC3P53804 2025 aa4.96□□□□□ -1.62
HMGB1P46-201ENST00000520062 HEG1Q9ULI3 1381 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 A0A1W2PN81 502 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 A0A1W2PS18 150 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 KBTBD13C9JR72 458 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 OLFM2O95897 454 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 IGHV4-39P01824 125 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 C8orf89P0DMQ9 161 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 CCND3P30281 292 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 CHRNA7P36544 502 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 IER3P46695 156 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 HOXA1P49639 335 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 FUT6P51993 359 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 KIAA1024LP59773 190 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 MBTD1Q05BQ5 628 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 LASP1Q14847 261 aaKnown RBP4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 ODF4Q2M2E3 257 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 KIF19Q2TAC6 998 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 IQCCQ4KMZ1 466 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 CYB5D1Q6P9G0 228 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 UNQ6126/PRO20091Q6UXV3 157 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 OR4K1Q8NGD4 311 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 NCOA7Q8NI08 942 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 SLC26A7Q8TE54 656 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 CDHR1Q96JP9 859 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 FAM71F1Q96KD3 344 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 KLHL5Q96PQ7 755 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 POLR3CQ9BUI4 534 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 LSG1Q9H089 658 aaKnown RBP4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 SRD5A3Q9H8P0 318 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 SLC38A7Q9NVC3 462 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 TRPC4Q9UBN4 977 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 MALT1Q9UDY8 824 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 ZDHHC2Q9UIJ5 367 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 PA2G4Q9UQ80 394 aaKnown RBP4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 TMED3Q9Y3Q3 217 aa4.95□□□□□ -1.62
HMGB1P46-201ENST00000520062 C13orf42A0A1B0GVH6 325 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 O00370 1275 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 PGRMC2O15173 223 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 SNX3O60493 162 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 PRAF2O60831 178 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 CTSVO60911 334 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 CDK4P11802 303 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 NR2C2P49116 596 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 ZNF415Q09FC8 603 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 SLC39A14Q15043 492 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 RPS6KA1Q15418 735 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 PHKG1Q16816 387 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 LCE1DQ5T752 114 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 SUSD4Q5VX71 490 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 TUBA1AQ71U36 451 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 ZNF554Q86TJ5 538 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 EXOC3L1Q86VI1 746 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 CREBRFQ8IUR6 639 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 SPATA2LQ8IUW3 424 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 PLD3Q8IV08 490 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 UBLCP1Q8WVY7 318 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 SMG7Q92540 1137 aaKnown RBP4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 BCL2L2Q92843 193 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 SGF29Q96ES7 293 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 SCRN2Q96FV2 425 aa4.94□□□□□ -1.62
HMGB1P46-201ENST00000520062 FAM20AQ96MK3 541 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms